RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 HTN3P15516 51 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 LYZP61626 148 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 SUPT4H1P63272 117 aaKnown RBP4.4□□□□□ -1.71
CLK1-212ENST00000482590 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 NMSQ5H8A3 153 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 ZNF705AQ6ZN79 300 aaPredicted RBP4.4□□□□□ -1.71
CLK1-212ENST00000482590 FOXI2Q6ZQN5 318 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 BAP18Q8IXM2 172 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 Q8N377 158 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 OR4C16Q8NGL9 310 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 SCRT1Q9BWW7 348 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 LAMTOR2Q9Y2Q5 125 aa4.4□□□□□ -1.71
CLK1-212ENST00000482590 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 ZNF705FA8MVS1 300 aaPredicted RBP4.39□□□□□ -1.71
CLK1-212ENST00000482590 COX7A2LO14548 114 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 RTL8CO15255 209 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 S100A8P05109 93 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 METTL15P1P0C7V9 234 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 ZNF705DP0CH99 300 aaPredicted RBP4.39□□□□□ -1.71
CLK1-212ENST00000482590 ZNF705BP0CI00 300 aaPredicted RBP4.39□□□□□ -1.71
CLK1-212ENST00000482590 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 GDF5OSQ5U4N7 250 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 SMIM4Q8WVI0 70 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 LITAFQ99732 161 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 WDR61Q9GZS3 305 aaKnown RBP4.39□□□□□ -1.71
CLK1-212ENST00000482590 RPRMQ9NS64 109 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 SCP2D1Q9UJQ7 156 aa4.39□□□□□ -1.71
CLK1-212ENST00000482590 MRPS16Q9Y3D3 137 aaKnown RBP4.39□□□□□ -1.71
CLK1-212ENST00000482590 PIGBOS1A0A0B4J2F0 54 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 C9JAW5 83 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 CXorf1O96002 111 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 SEC11BP0C7V7 166 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 DEFB1P60022 68 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 HIST1H1AQ02539 215 aaPredicted RBP4.38□□□□□ -1.71
CLK1-212ENST00000482590 OR8I2Q8N0Y5 310 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 C15orf53Q8NAA6 179 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 OR8A1Q8NGG7 326 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 OR10D4PQ8NGN7 298 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 NDFIP1Q9BT67 221 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 SLC35B3Q9H1N7 401 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 HIGD1AQ9Y241 93 aa4.38□□□□□ -1.71
CLK1-212ENST00000482590 SNRPGP15A8MWD9 76 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 CFDP00746 253 aaPredicted RBP4.37□□□□□ -1.71
CLK1-212ENST00000482590 INSP01308 110 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 BCL2P10415 239 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 CXCL5P42830 114 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 NMUP48645 174 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 ZNF90Q03938 601 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 ZNF79Q15937 498 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 ZNF709Q8N972 641 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 C2orf50Q96LR7 162 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 TRGV9Q99603 122 aa4.37□□□□□ -1.71
CLK1-212ENST00000482590 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 TRBV20OR9-2A0A075B6H5 130 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 IGKV1D-37A0A075B6S9 117 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 A0A0J9YX75 114 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 H7BYZ3 331 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 IAPPP10997 89 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 FAUP35544 74 aaKnown RBP4.36□□□□□ -1.71
CLK1-212ENST00000482590 TAS2R30P59541 319 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 AKR1C1Q04828 323 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 Q6ZR54 194 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 LYZL2Q7Z4W2 148 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 CARD19Q96LW7 228 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 CIB3Q96Q77 187 aaPredicted RBP4.36□□□□□ -1.71
CLK1-212ENST00000482590 SMIM3Q9BZL3 60 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 NAT8BQ9UHF3 227 aa4.36□□□□□ -1.71
CLK1-212ENST00000482590 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
CLK1-212ENST00000482590 TRAV9-1A0A075B6T8 112 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 TRAV5A0A0B4J249 113 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 M0R2Z0 102 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 SCO1O75880 301 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 S100A11P31949 105 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 SPINK13Q1W4C9 94 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 TCTE3Q8IZS6 198 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 RAB2BQ8WUD1 216 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 TOMM6Q96B49 74 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 HSPG2P98160 4391 aa4.35□□□□□ -1.71
CLK1-212ENST00000482590 FABP5P3A8MUU1 101 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 C16orf90A8MZG2 172 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 CCL18P55774 89 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 SLC38A11Q08AI6 406 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 RASL11AQ6T310 242 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
CLK1-212ENST00000482590 TRAV12-2A0A075B6T6 113 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 IGKV1OR2-108A0A075B7D4 117 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
CLK1-212ENST00000482590 LINC00862A6NCI5 91 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms