RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 KNCNA6PVL3 124 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 PROK1P58294 105 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 UBE2D3P61077 147 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 UBE2D2P62837 147 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 GTSF1LQ9H1H1 148 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 LOC107984156A0A0G2JMH3 177 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 CFAP126Q5VTH2 177 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 ARL17AQ8IVW1 177 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 ZNF702PQ9H963 129 aa10.9□□□□□ -0.66
ATG4B-220ENST00000482507 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 FAM104AQ969W3 186 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 Q9UF83 564 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 DNAJC9-AS1A6NH13 148 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-220ENST00000482507 HTN1P15515 57 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 ZNF22P17026 224 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-220ENST00000482507 AZU1P20160 251 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 PSMB2P49721 201 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
ATG4B-220ENST00000482507 DLX4Q92988 240 aaPredicted RBP10.89□□□□□ -0.67
ATG4B-220ENST00000482507 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 I3L3M4 83 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 RNF152Q8N8N0 203 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
ATG4B-220ENST00000482507 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
ATG4B-220ENST00000482507 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
ATG4B-220ENST00000482507 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
ATG4B-220ENST00000482507 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
ATG4B-220ENST00000482507 SLURP1P55000 103 aa10.87□□□□□ -0.67
ATG4B-220ENST00000482507 RHODO00212 210 aa10.87□□□□□ -0.67
ATG4B-220ENST00000482507 HIST2H2BDQ6DRA6 164 aa10.87□□□□□ -0.67
ATG4B-220ENST00000482507 LEPROTO15243 131 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 ELANEP08246 267 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 CEMP1Q6PRD7 247 aaPredicted RBP10.86□□□□□ -0.67
ATG4B-220ENST00000482507 PTH2Q96A98 100 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 SPATA25Q9BR10 227 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 TRGV11A0A075B6L2 103 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 TCL1BO95988 128 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 DEFB131AP59861 70 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 SIGMAR1Q99720 223 aa10.86□□□□□ -0.67
ATG4B-220ENST00000482507 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
ATG4B-220ENST00000482507 J3QR89 54 aa10.85□□□□□ -0.67
ATG4B-220ENST00000482507 Q6ZSN1 163 aa10.85□□□□□ -0.67
ATG4B-220ENST00000482507 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
ATG4B-220ENST00000482507 A4D1N5 150 aa10.84□□□□□ -0.67
ATG4B-220ENST00000482507 DUX3Q96PT4 197 aa10.84□□□□□ -0.67
ATG4B-220ENST00000482507 C1QTNF4Q9BXJ3 329 aa10.84□□□□□ -0.67
ATG4B-220ENST00000482507 VCX2Q9H322 139 aa10.84□□□□□ -0.67
ATG4B-220ENST00000482507 FOXI1Q12951 378 aa10.84□□□□□ -0.67
ATG4B-220ENST00000482507 H3BMM0 161 aa10.83□□□□□ -0.68
ATG4B-220ENST00000482507 RNASE13Q5GAN3 156 aaKnown RBP10.83□□□□□ -0.68
ATG4B-220ENST00000482507 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
ATG4B-220ENST00000482507 PRO1854Q9UHT4 67 aa10.83□□□□□ -0.68
ATG4B-220ENST00000482507 A8MTW9 85 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 NACAE9PAV3 2078 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 TRAV2A0A0B4J234 112 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 CD28P10747 220 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 FHL3Q13643 280 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 RAX2Q96IS3 184 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
ATG4B-220ENST00000482507 Q6ZSV7 163 aa10.81□□□□□ -0.68
ATG4B-220ENST00000482507 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
ATG4B-220ENST00000482507 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
ATG4B-220ENST00000482507 SPXQ9BT56 116 aa10.81□□□□□ -0.68
ATG4B-220ENST00000482507 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 ATP6V0E2Q8NHE4 81 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 A0A0J9YXY3 114 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 IGHV3-30-3P0DP02 117 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 HILS1P60008 231 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 TMEM86BQ8N661 226 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 C2CD3Q4AC94 2353 aa10.8□□□□□ -0.68
ATG4B-220ENST00000482507 M0R2P5 195 aa10.79□□□□□ -0.68
ATG4B-220ENST00000482507 IGHV3-33P01772 117 aa10.79□□□□□ -0.68
ATG4B-220ENST00000482507 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
ATG4B-220ENST00000482507 LITAFQ99732 161 aa10.79□□□□□ -0.68
ATG4B-220ENST00000482507 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
ATG4B-220ENST00000482507 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
ATG4B-220ENST00000482507 CRLF1O75462 422 aa10.78□□□□□ -0.68
ATG4B-220ENST00000482507 SBSPONQ8IVN8 264 aa10.78□□□□□ -0.68
ATG4B-220ENST00000482507 C11orf44Q8N8P7 122 aa10.78□□□□□ -0.68
ATG4B-220ENST00000482507 TNFRSF18Q9Y5U5 241 aa10.78□□□□□ -0.68
ATG4B-220ENST00000482507 A8MZ25 164 aa10.78□□□□□ -0.68
ATG4B-220ENST00000482507 TRBV20-1A0A075B6N2 111 aa10.77□□□□□ -0.68
ATG4B-220ENST00000482507 H7C2G1 150 aa10.77□□□□□ -0.68
ATG4B-220ENST00000482507 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.68
ATG4B-220ENST00000482507 SCGB1C2P0DMR2 95 aa10.77□□□□□ -0.68
ATG4B-220ENST00000482507 LYRM7Q5U5X0 104 aa10.77□□□□□ -0.68
ATG4B-220ENST00000482507 C11orf72Q8NBR9 251 aa10.77□□□□□ -0.68
ATG4B-220ENST00000482507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms