RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
GGPS1-205ENST00000482013 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
GGPS1-205ENST00000482013 PRADC1Q9BSG0 188 aa8.32□□□□□ -1.08
GGPS1-205ENST00000482013 UBE2D3P61077 147 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 UBE2D2P62837 147 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
GGPS1-205ENST00000482013 SMAGPQ0VAQ4 97 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 FHL2Q14192 279 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 PMVKQ15126 192 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 SPANXA1Q9NS26 97 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 HHLA3Q9XRX5 114 aa8.31□□□□□ -1.08
GGPS1-205ENST00000482013 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
GGPS1-205ENST00000482013 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
GGPS1-205ENST00000482013 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 TEX48A0A1B0GUV7 120 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 PRSS29PA6NIE9 313 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 CHCHD7Q9BUK0 85 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 GTSF1LQ9H1H1 148 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
GGPS1-205ENST00000482013 Q9UF83 564 aa8.3□□□□□ -1.08
GGPS1-205ENST00000482013 COX8AP10176 69 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 EMP1P54849 157 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 Q8NAQ8 132 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 C14orf144Q96I85 54 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 CST9LQ9H4G1 147 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
GGPS1-205ENST00000482013 NOTCH3Q9UM47 2321 aa8.29□□□□□ -1.08
GGPS1-205ENST00000482013 IGHV4-28A0A0C4DH34 117 aa8.28□□□□□ -1.08
GGPS1-205ENST00000482013 DLEU1O43261 78 aa8.28□□□□□ -1.08
GGPS1-205ENST00000482013 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-205ENST00000482013 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
GGPS1-205ENST00000482013 H7C423 109 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 HNRNPA3P51991 378 aaKnown RBP8.27□□□□□ -1.09
GGPS1-205ENST00000482013 MRPS36P82909 103 aaKnown RBP8.27□□□□□ -1.09
GGPS1-205ENST00000482013 ANKRD39Q53RE8 183 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 STPG4Q8N801 248 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 AMELXQ99217 191 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 VCX2Q9H322 139 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
GGPS1-205ENST00000482013 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
GGPS1-205ENST00000482013 IGLV4-3A0A075B6K6 122 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 GAGE12JA6NER3 117 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 SIVA1O15304 175 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 LINC00694P0DN24 101 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 DAD1P61803 113 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 GAGE1Q13065 139 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 GAGE4Q13068 117 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 GAGE5Q13069 117 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 GAGE13Q4V321 117 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 DEFB104AQ8WTQ1 72 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
GGPS1-205ENST00000482013 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
GGPS1-205ENST00000482013 M0R143 59 aa8.25□□□□□ -1.09
GGPS1-205ENST00000482013 SBSPONQ8IVN8 264 aa8.25□□□□□ -1.09
GGPS1-205ENST00000482013 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
GGPS1-205ENST00000482013 VWFP04275 2813 aa8.25□□□□□ -1.09
GGPS1-205ENST00000482013 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 C11orf86A6NJI1 115 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 G3V4G9 280 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 ATP5G1P05496 136 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 NTM-AS1Q6ZSK4 140 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 TMEM243Q9BU79 118 aa8.24□□□□□ -1.09
GGPS1-205ENST00000482013 TRBV25-1A0A075B6N4 114 aa8.23□□□□□ -1.09
GGPS1-205ENST00000482013 FGF6P10767 208 aa8.23□□□□□ -1.09
GGPS1-205ENST00000482013 HERVK_113P61574 105 aa8.23□□□□□ -1.09
GGPS1-205ENST00000482013 CTAG1AP78358 180 aa8.23□□□□□ -1.09
GGPS1-205ENST00000482013 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
GGPS1-205ENST00000482013 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
GGPS1-205ENST00000482013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.22□□□□□ -1.09
GGPS1-205ENST00000482013 IGKV2-29A2NJV5 120 aaPredicted RBP8.22□□□□□ -1.09
GGPS1-205ENST00000482013 E9PLD3 99 aa8.22□□□□□ -1.09
GGPS1-205ENST00000482013 PAX4O43316 350 aa8.22□□□□□ -1.09
GGPS1-205ENST00000482013 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
GGPS1-205ENST00000482013 ATP6V0E2Q8NHE4 81 aa8.22□□□□□ -1.09
GGPS1-205ENST00000482013 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
GGPS1-205ENST00000482013 C2orf88Q9BSF0 95 aa8.22□□□□□ -1.09
GGPS1-205ENST00000482013 C11orf68Q9H3H3 251 aaKnown RBP8.22□□□□□ -1.09
GGPS1-205ENST00000482013 TRAV26-1A0A087WT03 109 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 TRBV6-8A0A0A6YYG3 113 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 GYPEP15421 78 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
GGPS1-205ENST00000482013 NMUP48645 174 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 KPRPQ5T749 579 aaPredicted RBP8.21□□□□□ -1.1
GGPS1-205ENST00000482013 SH2D6Q7Z4S9 175 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 SNHG12Q9BXW3 62 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 HIGD1BQ9P298 99 aa8.21□□□□□ -1.1
GGPS1-205ENST00000482013 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
GGPS1-205ENST00000482013 TINCRA0A1B0GVN0 87 aa8.2□□□□□ -1.1
GGPS1-205ENST00000482013 UBE2L6O14933 153 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms