RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 TGP01266 2768 aa5.88□□□□□ -1.47
USP54-212ENST00000480210 TRGV2A0A075B6R0 118 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 TRGV1A0A0A0MS02 117 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 PGPEP1LA6NFU8 196 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 F2Z2F3 143 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 H3BMG7 143 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 RNASE3P12724 160 aaKnown RBP5.87□□□□□ -1.47
USP54-212ENST00000480210 NANOS2P60321 138 aaKnown RBP5.87□□□□□ -1.47
USP54-212ENST00000480210 RIGQ13278 110 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 CEMP1Q6PRD7 247 aaPredicted RBP5.87□□□□□ -1.47
USP54-212ENST00000480210 NUP35Q8NFH5 326 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 PHLDA1Q8WV24 401 aaPredicted RBP5.87□□□□□ -1.47
USP54-212ENST00000480210 GTSF1Q8WW33 167 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 GTSF1LQ9H1H1 148 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 ERG28Q9UKR5 140 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 CELA1Q9UNI1 258 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
USP54-212ENST00000480210 DEFB131BA0A096LNP1 70 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 TRAV4A0A0B4J268 109 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 A8MWV9 139 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 SNAI2O43623 268 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 ARMS2P0C7Q2 107 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 DEFB130BP0DP73 79 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 DEFB130AP0DP74 79 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 CACNG7P62955 275 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 ZNF876PQ49A33 203 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 Q6ZTC4 211 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 C2orf91Q6ZV80 131 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
USP54-212ENST00000480210 PGPEP1Q9NXJ5 209 aa5.86□□□□□ -1.47
USP54-212ENST00000480210 STAB2Q8WWQ8 2551 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 H3BNG1 76 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 M0QXV9 152 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 GAGE7O76087 117 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 FOXA3P55318 350 aaPredicted RBP5.85□□□□□ -1.47
USP54-212ENST00000480210 Q6ZTI0 123 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 Q6ZVH6 145 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 C15orf53Q8NAA6 179 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 TM2D2Q9BX73 214 aa5.85□□□□□ -1.47
USP54-212ENST00000480210 SPANXB1Q9NS25 103 aaPredicted RBP5.85□□□□□ -1.47
USP54-212ENST00000480210 TMSB15BA0A087X1C1 80 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 hDV102S1A0JD36 115 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 HIGD1CA8MV81 97 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 E9PLD3 99 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 H3BVH4 76 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 RHODO00212 210 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 RS1O15537 224 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 IGLC6P0CF74 106 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 CASC10Q5T4H9 136 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 SPANXN1Q5VSR9 72 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 ZFAND6Q6FIF0 208 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 Q6Q795 121 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 RNASE7Q9H1E1 156 aaKnown RBP5.84□□□□□ -1.47
USP54-212ENST00000480210 DNAH7Q8WXX0 4024 aa5.84□□□□□ -1.47
USP54-212ENST00000480210 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 IGHV4-4A0A075B6R2 117 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 F5H768 121 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 ATP5LO75964 103 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 MRPL23Q16540 153 aaKnown RBP5.83□□□□□ -1.48
USP54-212ENST00000480210 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 PRO0255Q9UI72 69 aa5.83□□□□□ -1.48
USP54-212ENST00000480210 TRGV4A0A0C4DH28 118 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 NXPH4O95158 308 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 HBDP02042 147 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 SPINK8P0C7L1 97 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 FGF6P10767 208 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 CNFNQ9BYD5 112 aa5.82□□□□□ -1.48
USP54-212ENST00000480210 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 TRBV6-4A0A1B0GX49 114 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 LINC01549A6NIU2 74 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 IGLL5B9A064 214 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 M0R381 172 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 APOMO95445 188 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 HTN3P15516 51 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 GCSHP23434 173 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 CAMPP49913 170 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 FOXI1Q12951 378 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 FHL2Q14192 279 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 CFAP126Q5VTH2 177 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 LYZL1Q6UWQ5 148 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 CEND1Q8N111 149 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 PPDPFLQ8WWR9 84 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 PRADC1Q9BSG0 188 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 MAP1LC3AQ9H492 121 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 HHLA3Q9XRX5 114 aa5.81□□□□□ -1.48
USP54-212ENST00000480210 GAGE12JA6NER3 117 aa5.8□□□□□ -1.48
USP54-212ENST00000480210 PAX4O43316 350 aa5.8□□□□□ -1.48
USP54-212ENST00000480210 EVI2AP22794 236 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms