RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 BAALCQ8WXS3 180 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 PRADC1Q9BSG0 188 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 VWFP04275 2813 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 UBE2D3P61077 147 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 UBE2D2P62837 147 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 PMVKQ15126 192 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 Q8NAQ8 132 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 ZNRF2Q8NHG8 242 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 PMCHL2Q9BQD1 86 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
VTI1A-204ENST00000480057 NOTCH3Q9UM47 2321 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 IGHV4-28A0A0C4DH34 117 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 EMP1P54849 157 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 DEFA6Q01524 100 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 SMAGPQ0VAQ4 97 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 TMEM97Q5BJF2 176 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 CHCHD7Q9BUK0 85 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
VTI1A-204ENST00000480057 MRPL35Q9NZE8 188 aaKnown RBP7.81□□□□□ -1.16
VTI1A-204ENST00000480057 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
VTI1A-204ENST00000480057 FBN1P35555 2871 aaKnown RBP7.8□□□□□ -1.16
VTI1A-204ENST00000480057 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
VTI1A-204ENST00000480057 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
VTI1A-204ENST00000480057 RPL39P62891 51 aaKnown RBP7.8□□□□□ -1.16
VTI1A-204ENST00000480057 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
VTI1A-204ENST00000480057 Q9UF83 564 aa7.8□□□□□ -1.16
VTI1A-204ENST00000480057 H7C423 109 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 SPART-AS1P0CW21 52 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 DEFB130BP0DP73 79 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 DEFB130AP0DP74 79 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 CST9LQ9H4G1 147 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
VTI1A-204ENST00000480057 IGLV4-3A0A075B6K6 122 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 GAGE12JA6NER3 117 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 G3V4G9 280 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 DLEU1O43261 78 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 COX8AP10176 69 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
VTI1A-204ENST00000480057 GAGE1Q13065 139 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 GAGE4Q13068 117 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 GAGE5Q13069 117 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 GAGE13Q4V321 117 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 SLC25A34Q6PIV7 304 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 PHLDA1Q8WV24 401 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-204ENST00000480057 PRO0255Q9UI72 69 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
VTI1A-204ENST00000480057 MRPS16Q9Y3D3 137 aaKnown RBP7.78□□□□□ -1.16
VTI1A-204ENST00000480057 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
VTI1A-204ENST00000480057 HNRNPA3P51991 378 aaKnown RBP7.77□□□□□ -1.17
VTI1A-204ENST00000480057 DAD1P61803 113 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 ANKRD39Q53RE8 183 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 KPRPQ5T749 579 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-204ENST00000480057 NFE4Q86UQ8 179 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 C14orf144Q96I85 54 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 AMELXQ99217 191 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 VCX2Q9H322 139 aa7.77□□□□□ -1.17
VTI1A-204ENST00000480057 C11orf68Q9H3H3 251 aaKnown RBP7.77□□□□□ -1.17
VTI1A-204ENST00000480057 IGLV4-69A0A075B6H9 119 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 ATP5G1P05496 136 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 SBSPONQ8IVN8 264 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 STPG4Q8N801 248 aa7.76□□□□□ -1.17
VTI1A-204ENST00000480057 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 SIVA1O15304 175 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-204ENST00000480057 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 MAST4O15021 2626 aa7.75□□□□□ -1.17
VTI1A-204ENST00000480057 TRRAPQ9Y4A5 3859 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 TRBV25-1A0A075B6N4 114 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 FGF6P10767 208 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-204ENST00000480057 HERVK_113P61574 105 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 FAM104AQ969W3 186 aa7.74□□□□□ -1.17
VTI1A-204ENST00000480057 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 ANK2Q01484 3957 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-204ENST00000480057 LOC100131303A0A0U1RQF7 123 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 IGKV2-29A2NJV5 120 aaPredicted RBP7.73□□□□□ -1.17
VTI1A-204ENST00000480057 E9PLD3 99 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 M0R143 59 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 PAX4O43316 350 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 GYPEP15421 78 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 SH2D6Q7Z4S9 175 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 ATP6V0E2Q8NHE4 81 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 C2orf88Q9BSF0 95 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
VTI1A-204ENST00000480057 TRBV6-8A0A0A6YYG3 113 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms