RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 MYCNOSP40205 109 aa8.65□□□□□ -1.02
RAPGEF3-209ENST00000479866 ZNF80P51504 273 aaPredicted RBP8.65□□□□□ -1.02
RAPGEF3-209ENST00000479866 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
RAPGEF3-209ENST00000479866 XCL2Q9UBD3 114 aa8.65□□□□□ -1.02
RAPGEF3-209ENST00000479866 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.03
RAPGEF3-209ENST00000479866 SETXQ7Z333 2677 aaKnown RBP8.64□□□□□ -1.03
RAPGEF3-209ENST00000479866 DPM2O94777 84 aa8.64□□□□□ -1.03
RAPGEF3-209ENST00000479866 TMEM86BQ8N661 226 aa8.64□□□□□ -1.03
RAPGEF3-209ENST00000479866 C2orf48Q96LS8 159 aa8.64□□□□□ -1.03
RAPGEF3-209ENST00000479866 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 ZNF492Q9P255 531 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 MXRA5Q9NR99 2828 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 CR1P17927 2039 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 SMIM27A0A1W2PRY6 76 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 IFI27L1Q96BM0 104 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 MRPS12O15235 138 aaKnown RBP8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 GNRH2O43555 120 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
RAPGEF3-209ENST00000479866 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 IGHV3-73A0A0B4J1V6 119 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 GDF5OSQ5U4N7 250 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 K7EMT4 169 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 HILS1P60008 231 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 FHL3Q13643 280 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 RASL10AQ92737 203 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 CARD19Q96LW7 228 aa8.62□□□□□ -1.03
RAPGEF3-209ENST00000479866 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 D6R8Y8 96 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 IGLV2-11P01706 119 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 CRIP1P50238 77 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 MORN3Q6PF18 240 aaPredicted RBP8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 MLST8Q9BVC4 326 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 CRIP2P52943 208 aaPredicted RBP8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 HIGD1BQ9P298 99 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 A0A087WWL8 130 aa8.61□□□□□ -1.03
RAPGEF3-209ENST00000479866 H3BMM0 161 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 FSHBP01225 129 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 IGKCP01834 107 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 LEPP41159 167 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 DKK2Q9UBU2 259 aa8.6□□□□□ -1.03
RAPGEF3-209ENST00000479866 KMT2BQ9UMN6 2715 aaPredicted RBP8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 HIVEP1P15822 2718 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 TRAV26-2A0A0B4J265 109 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
RAPGEF3-209ENST00000479866 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.04
RAPGEF3-209ENST00000479866 A0A1B0GX51 115 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 NPC2P61916 151 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 CFHR3Q02985 330 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 HLA-DRB4P13762 266 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 CT83Q5H943 113 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 HLA-DRB4X5D2U9 266 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZNF747Q9BV97 191 aa8.58□□□□□ -1.04
RAPGEF3-209ENST00000479866 MYMXA0A1B0GTQ4 84 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 FGF6P10767 208 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 KLF5Q13887 457 aaPredicted RBP8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 J3QQQ9 107 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 Q8N1Y9 231 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 IGHV3-53P01767 116 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 C9orf47Q6ZRZ4 202 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
RAPGEF3-209ENST00000479866 PRM2P04554 102 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 MPLKIPQ8TAP9 179 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 GATA1P15976 413 aaPredicted RBP8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 IGKV3D-20A0A0C4DH25 116 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 K7EQG2 157 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 PRR9Q5T870 116 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZNF876PQ49A33 203 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 HBDP02042 147 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 HIST1H4AP62805 103 aaKnown RBP8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 COL6A5A8TX70 2615 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 M0R2P5 195 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 NPYP01303 97 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 KRTAP1-1Q07627 177 aa8.55□□□□□ -1.04
RAPGEF3-209ENST00000479866 A0A0J9YX75 114 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms