RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 LCE2BO14633 110 aa7.05□□□□□ -1.28
RAD51B-208ENST00000479335 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
RAD51B-208ENST00000479335 LINC00612Q8N6U2 182 aa7.05□□□□□ -1.28
RAD51B-208ENST00000479335 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
RAD51B-208ENST00000479335 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
RAD51B-208ENST00000479335 VWFP04275 2813 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 TRBV7-3A0A075B6L6 115 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 TRBV6-4A0A1B0GX49 114 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 K7EQD1 137 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 SIVA1O15304 175 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
RAD51B-208ENST00000479335 RPL36AP83881 106 aaKnown RBP7.04□□□□□ -1.28
RAD51B-208ENST00000479335 COTL1Q14019 142 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 STPG4Q8N801 248 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 RPL36ALQ969Q0 106 aaKnown RBP7.04□□□□□ -1.28
RAD51B-208ENST00000479335 SNHG12Q9BXW3 62 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 X6R8D5 127 aa7.04□□□□□ -1.28
RAD51B-208ENST00000479335 TRGV2A0A075B6R0 118 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 GAGE12BA1L429 117 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 GAGE7O76087 117 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 GAGE12FP0CL80 117 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 GAGE12GP0CL81 117 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 GAGE12IP0CL82 117 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 C12orf54Q6X4T0 127 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
RAD51B-208ENST00000479335 BOD1L2Q8IYS8 172 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
RAD51B-208ENST00000479335 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
RAD51B-208ENST00000479335 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
RAD51B-208ENST00000479335 NOTCH3Q9UM47 2321 aa7.02□□□□□ -1.29
RAD51B-208ENST00000479335 LYRM9A8MSI8 78 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 FGF6P10767 208 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 UBE2D3P61077 147 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 UBE2D2P62837 147 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 SLC25A29Q8N8R3 303 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 CHCHD7Q9BUK0 85 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 TIMM21Q9BVV7 248 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 SPANXA1Q9NS26 97 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 Q9UF83 564 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 A8MZ25 164 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 EGFEM1PQ0D2K5 195 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 SMAGPQ0VAQ4 97 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 PRIMA1Q86XR5 153 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 VCX2Q9H322 139 aa7.01□□□□□ -1.29
RAD51B-208ENST00000479335 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 TRGV4A0A0C4DH28 118 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 MIFP14174 115 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 FHL2Q14192 279 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 NFE4Q86UQ8 179 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 DEFB104AQ8WTQ1 72 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 AMELXQ99217 191 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 PRADC1Q9BSG0 188 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 GTSF1LQ9H1H1 148 aa7□□□□□ -1.29
RAD51B-208ENST00000479335 IGLV4-69A0A075B6H9 119 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 IGHV4-30-4P0DP06 118 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 NMUP48645 174 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 MRPS36P82909 103 aaKnown RBP6.99□□□□□ -1.29
RAD51B-208ENST00000479335 RNF183Q96D59 192 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 UBE2D4Q9Y2X8 147 aa6.99□□□□□ -1.29
RAD51B-208ENST00000479335 C11orf86A6NJI1 115 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 E9PLD3 99 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 TMEM97Q5BJF2 176 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 COL5A1-AS1Q5SY13 56 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 OR11H2Q8NH07 326 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 PHLDA1Q8WV24 401 aaPredicted RBP6.98□□□□□ -1.29
RAD51B-208ENST00000479335 CSDC2Q9Y534 153 aaKnown RBP6.98□□□□□ -1.29
RAD51B-208ENST00000479335 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 H7C423 109 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 EMP1P54849 157 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 HERVK_113P61574 105 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 DEFB135Q30KP9 77 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
RAD51B-208ENST00000479335 GAGE12JA6NER3 117 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 GAGE1Q13065 139 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 GAGE4Q13068 117 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 GAGE5Q13069 117 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 GAGE13Q4V321 117 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
RAD51B-208ENST00000479335 LINC00694P0DN24 101 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 MPV17L2Q567V2 206 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 NTM-AS1Q6ZSK4 140 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 OPRPNQ99935 248 aaPredicted RBP6.96□□□□□ -1.3
RAD51B-208ENST00000479335 PRO0255Q9UI72 69 aa6.96□□□□□ -1.3
RAD51B-208ENST00000479335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
RAD51B-208ENST00000479335 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
RAD51B-208ENST00000479335 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
RAD51B-208ENST00000479335 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
RAD51B-208ENST00000479335 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
RAD51B-208ENST00000479335 KRTAP10-11P60412 298 aa6.95□□□□□ -1.3
RAD51B-208ENST00000479335 HSD52Q0P140 79 aa6.95□□□□□ -1.3
RAD51B-208ENST00000479335 DGAT2L7PQ6IED9 249 aa6.95□□□□□ -1.3
RAD51B-208ENST00000479335 Q8NAQ8 132 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms