RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 J3KRW8 73 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 SOCS3O14543 225 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 SNAI2O43623 268 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 APOMO95445 188 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 GCSHP23434 173 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 DEFB1P60022 68 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 ETDBQ3ZM63 59 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 FAM222AQ5U5X8 452 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 Q6AWC8 147 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 POM121L12Q8N7R1 296 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 OR10J6PQ8NGY7 276 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 SLC50A1Q9BRV3 221 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 PAXXQ9BUH6 204 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 SLC25A2Q9BXI2 301 aa4.74□□□□□ -1.65
VCP-205ENST00000479300 A0A096LNJ9 63 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 A0A1B0GUT8 65 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 FBLL1A6NHQ2 334 aaKnown RBP4.73□□□□□ -1.65
VCP-205ENST00000479300 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 LTAP01374 205 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 HBDP02042 147 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 CACNG7P62955 275 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 HERV-K104P63124 156 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 SPINK13Q1W4C9 94 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 C10orf113Q5VZT2 155 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 Q6Q795 121 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 LINC00305Q7Z4B0 112 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 SH2D6Q7Z4S9 175 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 RNF182Q8N6D2 247 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 SYT8Q8NBV8 401 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 OR8A1Q8NGG7 326 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 PPDPFLQ8WWR9 84 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 DAZAP1Q96EP5 407 aaKnown RBP4.73□□□□□ -1.65
VCP-205ENST00000479300 PGLYRP4Q96LB8 373 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 C20orf173Q96LM9 149 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 C18orf15Q96N68 181 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 LINC01587Q99440 93 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 EPDR1Q9UM22 224 aa4.73□□□□□ -1.65
VCP-205ENST00000479300 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 DMBT1Q9UGM3 2413 aaPredicted RBP4.72□□□□□ -1.65
VCP-205ENST00000479300 IGLV2-18A0A075B6J9 118 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 LYRM9A8MSI8 78 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 MT-ATP8P03928 68 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 HTN1P15515 57 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 EVI2AP22794 236 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 NMUP48645 174 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 RPL32P62910 135 aaKnown RBP4.72□□□□□ -1.65
VCP-205ENST00000479300 ODF1Q14990 250 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 ZNF493Q6ZR52 646 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 PCP2Q8IVA1 136 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 C1orf158Q8N1D5 194 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 MAPKAPK5-AS1Q8N8E1 139 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 IFI27L1Q96BM0 104 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 C20orf78Q9BR46 151 aa4.72□□□□□ -1.65
VCP-205ENST00000479300 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
VCP-205ENST00000479300 NACAE9PAV3 2078 aa4.71□□□□□ -1.65
VCP-205ENST00000479300 TRAV8-2A0A0B4J237 113 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 LINC01546A6NGU7 62 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 A8MTW9 85 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 M0QXV9 152 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 CDK2AP2O75956 126 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 SLC25A5P05141 298 aaKnown RBP4.71□□□□□ -1.66
VCP-205ENST00000479300 DEFB130BP0DP73 79 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 DEFB130AP0DP74 79 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 LEPP41159 167 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 XGP55808 180 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 C15orf53Q8NAA6 179 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 C16orf74Q96GX8 76 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 LINC00479Q96M42 142 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 PRELID3AQ96N28 172 aa4.71□□□□□ -1.66
VCP-205ENST00000479300 TRBV25-1A0A075B6N4 114 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 TRAV12-2A0A075B6T6 113 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 B5MCH6 92 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 F5H768 121 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 K7ERJ3 54 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 RHODO00212 210 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 ATP5LO75964 103 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE7O76087 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 ATP5G1P05496 136 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE12FP0CL80 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE12GP0CL81 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE12IP0CL82 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 ASIPP42127 132 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 ZNF138P52744 262 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 GAGE4Q13068 117 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 AMTNQ6UX39 209 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 PATE2Q6UY27 113 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 Q86TA4 180 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 TEN1Q86WV5 123 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 Q8N1X5 172 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 SPXQ9BT56 116 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 AAMDCQ9H7C9 122 aa4.7□□□□□ -1.66
VCP-205ENST00000479300 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms