RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
C9orf3-217ENST00000479161 EREGO14944 169 aa10.36□□□□□ -0.75
C9orf3-217ENST00000479161 Q0VG73 95 aa10.36□□□□□ -0.75
C9orf3-217ENST00000479161 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
C9orf3-217ENST00000479161 TRAV26-2A0A0B4J265 109 aa10.35□□□□□ -0.75
C9orf3-217ENST00000479161 COTL1Q14019 142 aa10.35□□□□□ -0.75
C9orf3-217ENST00000479161 RMI2Q96E14 147 aa10.35□□□□□ -0.75
C9orf3-217ENST00000479161 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
C9orf3-217ENST00000479161 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
C9orf3-217ENST00000479161 A0A087WTM6 91 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 A0A1B0GXF2 115 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 H7C423 109 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 Q8N3U1 123 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
C9orf3-217ENST00000479161 SDHAF1A6NFY7 115 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 RAB5AP20339 215 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 POLR2KP53803 58 aaKnown RBP10.33□□□□□ -0.76
C9orf3-217ENST00000479161 HBBP68871 147 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
C9orf3-217ENST00000479161 YPEL4Q96NS1 127 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 PRR34Q9NV39 138 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
C9orf3-217ENST00000479161 TRBV24-1A0A075B6N3 115 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 LRCOL1A6NCL2 159 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 I3L3M4 83 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 PSCAO43653 123 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 TMEM70Q9BUB7 260 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 ST20Q9HBF5 79 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 TMEM242Q9NWH2 141 aa10.32□□□□□ -0.76
C9orf3-217ENST00000479161 RBX1P62877 108 aa10.31□□□□□ -0.76
C9orf3-217ENST00000479161 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
C9orf3-217ENST00000479161 Q9HAA7 133 aa10.31□□□□□ -0.76
C9orf3-217ENST00000479161 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 PPBPP02775 128 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 AMTP48728 403 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 CAMPP49913 170 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 RPL32P62910 135 aaKnown RBP10.3□□□□□ -0.76
C9orf3-217ENST00000479161 MIAQ16674 131 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 C20orf78Q9BR46 151 aa10.3□□□□□ -0.76
C9orf3-217ENST00000479161 VCYO14598 125 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 PHOX2AO14813 284 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 ANGP03950 147 aaKnown RBP10.29□□□□□ -0.76
C9orf3-217ENST00000479161 MRPL51Q4U2R6 128 aaKnown RBP10.29□□□□□ -0.76
C9orf3-217ENST00000479161 ENHOQ6UWT2 76 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 NRACQ8N912 160 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 NTN5Q8WTR8 489 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-217ENST00000479161 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 BTF3L4Q96K17 158 aa10.29□□□□□ -0.76
C9orf3-217ENST00000479161 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 DNAH5Q8TE73 4624 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 S100A6P06703 90 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 ESDP10768 282 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 PMCHP20382 165 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
C9orf3-217ENST00000479161 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
C9orf3-217ENST00000479161 GAGE6Q13070 117 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
C9orf3-217ENST00000479161 Q8N976 141 aa10.28□□□□□ -0.76
C9orf3-217ENST00000479161 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 C5orf52A6NGY3 159 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 C16orf90A8MZG2 172 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 UBE2L6O14933 153 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 TCAPO15273 167 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 CRPP02741 224 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 APCSP02743 223 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 ZNF25P17030 456 aaPredicted RBP10.27□□□□□ -0.77
C9orf3-217ENST00000479161 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
C9orf3-217ENST00000479161 CKS2P33552 79 aa10.26□□□□□ -0.77
C9orf3-217ENST00000479161 C1orf43Q9BWL3 253 aa10.26□□□□□ -0.77
C9orf3-217ENST00000479161 TSHBP01222 138 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 SMIM6P0DI80 62 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 AKR1D1P51857 326 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 S100A12P80511 92 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 LINC00269Q8N2A0 174 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 Q8N814 137 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 LAMTOR2Q9Y2Q5 125 aa10.25□□□□□ -0.77
C9orf3-217ENST00000479161 IGKV2D-24A0A075B6R9 120 aa10.24□□□□□ -0.77
C9orf3-217ENST00000479161 PRSS47A8MTI9 375 aa10.24□□□□□ -0.77
C9orf3-217ENST00000479161 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
C9orf3-217ENST00000479161 REG3AQ06141 175 aa10.24□□□□□ -0.77
C9orf3-217ENST00000479161 MRPL52Q86TS9 123 aaKnown RBP10.24□□□□□ -0.77
C9orf3-217ENST00000479161 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
C9orf3-217ENST00000479161 IGLV4-60A0A075B6I1 120 aa10.23□□□□□ -0.77
C9orf3-217ENST00000479161 SMKR1H3BMG3 65 aa10.23□□□□□ -0.77
C9orf3-217ENST00000479161 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
C9orf3-217ENST00000479161 SMAGPQ0VAQ4 97 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms