RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 SDIM1Q6ZPB5 146 aa14.06□□□□□ -0.16
MCF2L2-210ENST00000478652 TCTE3Q8IZS6 198 aa14.06□□□□□ -0.16
MCF2L2-210ENST00000478652 RNASE7Q9H1E1 156 aaKnown RBP14.06□□□□□ -0.16
MCF2L2-210ENST00000478652 CNFNQ9BYD5 112 aa14.05□□□□□ -0.16
MCF2L2-210ENST00000478652 BIN3Q9NQY0 253 aa14.05□□□□□ -0.16
MCF2L2-210ENST00000478652 TRAV26-2A0A0B4J265 109 aa14.04□□□□□ -0.16
MCF2L2-210ENST00000478652 SLC51BQ86UW2 128 aa14.04□□□□□ -0.16
MCF2L2-210ENST00000478652 GATD1Q8NB37 220 aa14.04□□□□□ -0.16
MCF2L2-210ENST00000478652 TRAV8-4A0A0B4J246 113 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 hDV102S1A0JD36 115 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 SLPIP03973 132 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 AMTP48728 403 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 TWIST1Q15672 202 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 WDR73Q6P4I2 378 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 CLRN3Q8NCR9 226 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 OCC1Q8TAD7 63 aa14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 RPP21Q9H633 154 aaKnown RBP14.03□□□□□ -0.16
MCF2L2-210ENST00000478652 OXTP01178 125 aa14.02□□□□□ -0.17
MCF2L2-210ENST00000478652 CNBPP62633 177 aaKnown RBP14.02□□□□□ -0.17
MCF2L2-210ENST00000478652 COTL1Q14019 142 aa14.02□□□□□ -0.17
MCF2L2-210ENST00000478652 UBE2L6O14933 153 aa14.01□□□□□ -0.17
MCF2L2-210ENST00000478652 GTSF1Q8WW33 167 aa14.01□□□□□ -0.17
MCF2L2-210ENST00000478652 RPL39LQ96EH5 51 aaKnown RBP14.01□□□□□ -0.17
MCF2L2-210ENST00000478652 FOXA3P55318 350 aaPredicted RBP14□□□□□ -0.17
MCF2L2-210ENST00000478652 CHTF8P0CG12 524 aa13.99□□□□□ -0.17
MCF2L2-210ENST00000478652 CIRBPQ14011 172 aaKnown RBP13.99□□□□□ -0.17
MCF2L2-210ENST00000478652 Q6ZNX1 250 aa13.99□□□□□ -0.17
MCF2L2-210ENST00000478652 TAGLN2P37802 199 aaKnown RBP13.98□□□□□ -0.17
MCF2L2-210ENST00000478652 C15orf56Q8N910 161 aa13.98□□□□□ -0.17
MCF2L2-210ENST00000478652 IGKV3OR2-268A0A0C4DH90 116 aa13.97□□□□□ -0.17
MCF2L2-210ENST00000478652 GAGE12HA6NDE8 117 aa13.96□□□□□ -0.17
MCF2L2-210ENST00000478652 AP5S1Q9NUS5 200 aa13.96□□□□□ -0.17
MCF2L2-210ENST00000478652 IGHV3-64A0A075B6Q5 118 aa13.95□□□□□ -0.18
MCF2L2-210ENST00000478652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.95□□□□□ -0.18
MCF2L2-210ENST00000478652 IGKV2-29A2NJV5 120 aaPredicted RBP13.95□□□□□ -0.18
MCF2L2-210ENST00000478652 ALKAL2Q6UX46 152 aa13.94□□□□□ -0.18
MCF2L2-210ENST00000478652 HMCN2Q8NDA2 5059 aa13.94□□□□□ -0.18
MCF2L2-210ENST00000478652 GATCO43716 136 aaKnown RBP13.93□□□□□ -0.18
MCF2L2-210ENST00000478652 A0A087WYN8 130 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 SDHAF1A6NFY7 115 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 GAS8-AS1O95177 125 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 HIGD2BQ4VC39 106 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 SERTAD4-AS1Q5TG53 156 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 SPACA4Q8TDM5 124 aa13.92□□□□□ -0.18
MCF2L2-210ENST00000478652 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
MCF2L2-210ENST00000478652 APCSP02743 223 aa13.91□□□□□ -0.18
MCF2L2-210ENST00000478652 AMMECR1LQ6DCA0 310 aa13.91□□□□□ -0.18
MCF2L2-210ENST00000478652 RNASEKQ6P5S7 137 aaKnown RBP13.91□□□□□ -0.18
MCF2L2-210ENST00000478652 FAM231DQ6ZW35 169 aa13.91□□□□□ -0.18
MCF2L2-210ENST00000478652 NCR2O95944 276 aa13.9□□□□□ -0.18
MCF2L2-210ENST00000478652 FGF6P10767 208 aa13.9□□□□□ -0.18
MCF2L2-210ENST00000478652 SMIM15Q7Z3B0 74 aa13.9□□□□□ -0.18
MCF2L2-210ENST00000478652 CHCHD10Q8WYQ3 142 aaPredicted RBP13.9□□□□□ -0.18
MCF2L2-210ENST00000478652 FAM231BA6NCW3 169 aa13.89□□□□□ -0.19
MCF2L2-210ENST00000478652 CEBPGP53567 150 aa13.89□□□□□ -0.19
MCF2L2-210ENST00000478652 LYPD6BQ8NI32 183 aa13.89□□□□□ -0.19
MCF2L2-210ENST00000478652 BLOC1S1P78537 153 aa13.88□□□□□ -0.19
MCF2L2-210ENST00000478652 A8MWL6 223 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 MT1HL1P0DM35 61 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 COX6A2Q02221 97 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 PRSS3P2Q8NHM4 247 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 DPH3Q96FX2 82 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
MCF2L2-210ENST00000478652 hCG_2014768A0A024R1R8 64 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 H7C423 109 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 CT83Q5H943 113 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 CFAP161Q6P656 301 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 TEX261Q6UWH6 196 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 PLAC8Q9NZF1 115 aa13.86□□□□□ -0.19
MCF2L2-210ENST00000478652 GVQW2A0A096LPI5 108 aaPredicted RBP13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 TRBV6-5A0A0K0K1A5 114 aa13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 I3L3M4 83 aa13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 TSHBP01222 138 aa13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 RPS10P46783 165 aaKnown RBP13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 FOXI1Q12951 378 aa13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 TMEM242Q9NWH2 141 aa13.85□□□□□ -0.19
MCF2L2-210ENST00000478652 ESDP10768 282 aa13.84□□□□□ -0.19
MCF2L2-210ENST00000478652 PMCHP20382 165 aa13.84□□□□□ -0.19
MCF2L2-210ENST00000478652 IGKV2-24A0A0C4DH68 120 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 PHOX2AO14813 284 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 LINC01551Q86U37 167 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 SMIM7Q9BQ49 75 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 PLA2G2DQ9UNK4 145 aa13.83□□□□□ -0.2
MCF2L2-210ENST00000478652 HIGD1CA8MV81 97 aa13.82□□□□□ -0.2
MCF2L2-210ENST00000478652 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
MCF2L2-210ENST00000478652 XCL1P47992 114 aa13.82□□□□□ -0.2
MCF2L2-210ENST00000478652 Q6ZRU5 148 aa13.82□□□□□ -0.2
MCF2L2-210ENST00000478652 NDUFS6O75380 124 aaKnown RBP13.81□□□□□ -0.2
MCF2L2-210ENST00000478652 MAJINQ3KP22 176 aa13.81□□□□□ -0.2
MCF2L2-210ENST00000478652 LINC00526Q96FQ7 95 aa13.81□□□□□ -0.2
MCF2L2-210ENST00000478652 TMEM191AQ9H0A3 160 aa13.81□□□□□ -0.2
MCF2L2-210ENST00000478652 ST20Q9HBF5 79 aa13.81□□□□□ -0.2
MCF2L2-210ENST00000478652 A0A096LNI7 61 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 LINC00959A0A1B0GUT2 108 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 A0A1B0GUT8 65 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 CCL25O15444 150 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 POLR2KP53803 58 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms