RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SMR3BP02814 79 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-212ENST00000478616 Q0VG73 95 aa12.25□□□□□ -0.45
SREBF1-212ENST00000478616 CLPSL2Q6UWE3 100 aa12.25□□□□□ -0.45
SREBF1-212ENST00000478616 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
SREBF1-212ENST00000478616 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
SREBF1-212ENST00000478616 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
SREBF1-212ENST00000478616 LINC00269Q8N2A0 174 aa12.24□□□□□ -0.45
SREBF1-212ENST00000478616 TSKUQ8WUA8 353 aa12.24□□□□□ -0.45
SREBF1-212ENST00000478616 RMI2Q96E14 147 aa12.24□□□□□ -0.45
SREBF1-212ENST00000478616 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
SREBF1-212ENST00000478616 LINC00862A6NCI5 91 aa12.23□□□□□ -0.45
SREBF1-212ENST00000478616 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
SREBF1-212ENST00000478616 SRRM2Q9UQ35 2752 aaKnown RBP12.22□□□□□ -0.45
SREBF1-212ENST00000478616 HIGD1CA8MV81 97 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 FRZBQ92765 325 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 TMEM243Q9BU79 118 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 NAT8Q9UHE5 227 aa12.22□□□□□ -0.45
SREBF1-212ENST00000478616 MYCBP2O75592 4640 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 MIAQ16674 131 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 Q5VSD8 79 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 KCNIP4Q6PIL6 250 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
SREBF1-212ENST00000478616 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-212ENST00000478616 FAM231BA6NCW3 169 aa12.2□□□□□ -0.46
SREBF1-212ENST00000478616 EPM2AB3EWF7 344 aa12.2□□□□□ -0.46
SREBF1-212ENST00000478616 CRPP02741 224 aa12.2□□□□□ -0.46
SREBF1-212ENST00000478616 RPS10P46783 165 aaKnown RBP12.2□□□□□ -0.46
SREBF1-212ENST00000478616 PKIAP61925 76 aa12.2□□□□□ -0.46
SREBF1-212ENST00000478616 NUP35Q8NFH5 326 aa12.2□□□□□ -0.46
SREBF1-212ENST00000478616 TRBV6-5A0A0K0K1A5 114 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 REG3AQ06141 175 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 ADIRFQ15847 76 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 TMEM191AQ9H0A3 160 aa12.19□□□□□ -0.46
SREBF1-212ENST00000478616 FLG2Q5D862 2391 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-212ENST00000478616 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
SREBF1-212ENST00000478616 PRSS1P07477 247 aa12.18□□□□□ -0.46
SREBF1-212ENST00000478616 IGLV10-54A0A075B6I4 117 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 RAB4AP20338 218 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 AMTP48728 403 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 COTL1Q14019 142 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 AMN1Q8IY45 258 aa12.17□□□□□ -0.46
SREBF1-212ENST00000478616 TMEM218A2RU14 115 aa12.16□□□□□ -0.46
SREBF1-212ENST00000478616 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
SREBF1-212ENST00000478616 TSHBP01222 138 aa12.15□□□□□ -0.46
SREBF1-212ENST00000478616 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
SREBF1-212ENST00000478616 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
SREBF1-212ENST00000478616 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-212ENST00000478616 SMIM27A0A1W2PRY6 76 aa12.14□□□□□ -0.47
SREBF1-212ENST00000478616 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-212ENST00000478616 ESDP10768 282 aa12.14□□□□□ -0.47
SREBF1-212ENST00000478616 SCXQ7RTU7 201 aa12.14□□□□□ -0.47
SREBF1-212ENST00000478616 NRACQ8N912 160 aa12.14□□□□□ -0.47
SREBF1-212ENST00000478616 NCR2O95944 276 aa12.13□□□□□ -0.47
SREBF1-212ENST00000478616 SLPIP03973 132 aa12.13□□□□□ -0.47
SREBF1-212ENST00000478616 SMIM15Q7Z3B0 74 aa12.13□□□□□ -0.47
SREBF1-212ENST00000478616 HERC1Q15751 4861 aa12.11□□□□□ -0.47
SREBF1-212ENST00000478616 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
SREBF1-212ENST00000478616 F8W036 122 aa12.11□□□□□ -0.47
SREBF1-212ENST00000478616 I3L3M4 83 aa12.11□□□□□ -0.47
SREBF1-212ENST00000478616 KRTAP10-4P60372 401 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-212ENST00000478616 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-212ENST00000478616 TMEM242Q9NWH2 141 aa12.11□□□□□ -0.47
SREBF1-212ENST00000478616 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
SREBF1-212ENST00000478616 PANO1I0J062 215 aa12.1□□□□□ -0.47
SREBF1-212ENST00000478616 FGF6P10767 208 aa12.1□□□□□ -0.47
SREBF1-212ENST00000478616 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
SREBF1-212ENST00000478616 NAT8BQ9UHF3 227 aa12.1□□□□□ -0.47
SREBF1-212ENST00000478616 TRBV27A0A0K0K1C4 114 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 UBE2L6O14933 153 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 APCSP02743 223 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 INAFM2P0DMQ5 153 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 RIGQ13278 110 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
SREBF1-212ENST00000478616 C14orf177Q52M58 125 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 C15orf56Q8N910 161 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
SREBF1-212ENST00000478616 A0A1B0GXF2 115 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 CIRBP-AS1Q8TBR5 109 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 CHAC1Q9BUX1 264 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
SREBF1-212ENST00000478616 LRP1Q07954 4544 aaKnown RBP12.08□□□□□ -0.48
SREBF1-212ENST00000478616 H7C423 109 aa12.07□□□□□ -0.48
SREBF1-212ENST00000478616 PMCHP20382 165 aa12.07□□□□□ -0.48
SREBF1-212ENST00000478616 C10orf91Q5T1B1 145 aa12.06□□□□□ -0.48
SREBF1-212ENST00000478616 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
SREBF1-212ENST00000478616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-212ENST00000478616 FAT3Q8TDW7 4589 aa12.06□□□□□ -0.48
SREBF1-212ENST00000478616 GAGE12HA6NDE8 117 aa12.05□□□□□ -0.48
SREBF1-212ENST00000478616 CNBPP62633 177 aaKnown RBP12.05□□□□□ -0.48
SREBF1-212ENST00000478616 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
SREBF1-212ENST00000478616 SDIM1Q6ZPB5 146 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms