RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 LOC400499M0QZD8 3231 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 TRBV25-1A0A075B6N4 114 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 TRBV10-3A0A0K0K1G6 114 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 hDV103S1A0JD37 113 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 IQCF6A8MYZ5 107 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 BPY2O14599 106 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 IGHV1-69P01742 117 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 MSMBP08118 114 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 ROMO1P60602 79 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 SNRPGP62308 76 aaKnown RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 Q8IYB0 196 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 CLECL1Q8IZS7 167 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 RPRMLQ8N4K4 120 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 CNEP1R1Q8N9A8 125 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 BPESC1Q9GZL8 116 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 NHP2Q9NX24 153 aaKnown RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 ZFC3H1O60293 1989 aaKnown RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 EML5Q05BV3 1969 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 THADAQ6YHU6 1953 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 ZZEF1O43149 2961 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 TPRP12270 2363 aaKnown RBP2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 NUMA1Q14980 2115 aa2.35□□□□□ -2.03
FNDC3B-209ENST00000478016 GREB1Q4ZG55 1949 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 F5P12259 2224 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 ZFYVE26Q68DK2 2539 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 TRPM6Q9BX84 2022 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 SMG1Q96Q15 3661 aaKnown RBP2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 SH2D1AO60880 128 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 CLPSP04118 112 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 CD24P25063 80 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 IFI27P40305 119 aaPredicted RBP2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 CMC4P56277 68 aaPredicted RBP2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 FAM229BQ4G0N7 80 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 Q5VV11 94 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 PRO1854Q9UHT4 67 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 UBE2D4Q9Y2X8 147 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 CHD6Q8TD26 2715 aa2.34□□□□□ -2.03
FNDC3B-209ENST00000478016 AKAP13Q12802 2813 aa2.34□□□□□ -2.04
FNDC3B-209ENST00000478016 LAMA5O15230 3695 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 PKD1L2Q7Z442 2459 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 TNRC6BQ9UPQ9 1833 aaKnown RBP2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 IGLV7-46A0A075B6I9 117 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 A0A087WSZ3 146 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV3-15A0A0B4J1V0 119 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 TRAV1-2A0A0B4J238 106 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 TRAV22A0A0B4J277 110 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV5-10-1A0A0J9YXX1 117 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 A0A0J9YXY3 114 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 FAM223BA6NKX1 122 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 B4DSR2 109 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 HCG22E2RYF7 251 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 E7EUB6 86 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 K7ERS5 55 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 LECT2O14960 151 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 PPYP01298 95 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 IGLV3-25P01717 112 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 HMGA1P17096 107 aaKnown RBP2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 KRTAP7-1Q8IUC3 87 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 Q8N6K4 173 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 DEFB124Q8NES8 71 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 SMIM7Q9BQ49 75 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 ITPR1Q14643 2758 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 MUC22E2RYF6 1773 aaPredicted RBP2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 SPAG17Q6Q759 2223 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 ARID1AO14497 2285 aa2.33□□□□□ -2.04
FNDC3B-209ENST00000478016 PCDH15Q96QU1 1955 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 PCNX3Q9H6A9 2034 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 KIF26BQ2KJY2 2108 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV3-49A0A0A0MS15 119 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 LOC101927531A0A1B0GV80 90 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 A0A1B0GVX0 72 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 TMEM30CPA0ZSE6 113 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 A6NDX4 124 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 CEBPZOSA8MTT3 80 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 A8MWP4 228 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 LY6HO94772 140 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 LEPROTL1O95214 131 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 PLGLAQ15195 96 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 C15orf32Q32M92 178 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 C20orf197Q8N268 126 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 DEFB119Q8N690 84 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 ZNF525Q8N782 197 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 Q8N9W7 124 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 C20orf203Q8NBC4 194 aa2.32□□□□□ -2.04
FNDC3B-209ENST00000478016 MUC7Q8TAX7 377 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms