RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
PRPF39-203ENST00000477626 DNAH10Q8IVF4 4471 aa8.49□□□□□ -1.05
PRPF39-203ENST00000477626 HTN1P15515 57 aa8.49□□□□□ -1.05
PRPF39-203ENST00000477626 SPATA45Q537H7 98 aa8.49□□□□□ -1.05
PRPF39-203ENST00000477626 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
PRPF39-203ENST00000477626 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
PRPF39-203ENST00000477626 ATP5LO75964 103 aa8.48□□□□□ -1.05
PRPF39-203ENST00000477626 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
PRPF39-203ENST00000477626 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
PRPF39-203ENST00000477626 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
PRPF39-203ENST00000477626 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
PRPF39-203ENST00000477626 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 IGHV4-28A0A0C4DH34 117 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 CRYBA4P53673 196 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 RRN3P1Q2M238 152 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 PMCHL2Q9BQD1 86 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 VAMP8Q9BV40 100 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 PAM16Q9Y3D7 125 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 H7C1H1 209 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 APOC4P55056 127 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 ZNRF2Q8NHG8 242 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 TIMM21Q9BVV7 248 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
PRPF39-203ENST00000477626 DLEU1O43261 78 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 NUDT3O95989 172 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 VSIG2Q96IQ7 327 aa8.47□□□□□ -1.05
PRPF39-203ENST00000477626 MIFP14174 115 aa8.46□□□□□ -1.05
PRPF39-203ENST00000477626 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.05
PRPF39-203ENST00000477626 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
PRPF39-203ENST00000477626 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
PRPF39-203ENST00000477626 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
PRPF39-203ENST00000477626 C11orf68Q9H3H3 251 aaKnown RBP8.46□□□□□ -1.06
PRPF39-203ENST00000477626 IGHV3OR16-12A0A075B7B8 117 aa8.46□□□□□ -1.06
PRPF39-203ENST00000477626 OR4C5Q8NGB2 326 aa8.46□□□□□ -1.06
PRPF39-203ENST00000477626 COX8AP10176 69 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 DEFB135Q30KP9 77 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 F8VRH5 84 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 IGLV5-45A0A087WSX0 123 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 PRSS29PA6NIE9 313 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 KRTAP21-3Q3LHN1 58 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 ZC2HC1BQ5TFG8 222 aa8.45□□□□□ -1.06
PRPF39-203ENST00000477626 DAZ4Q86SG3 579 aaKnown RBP8.44□□□□□ -1.06
PRPF39-203ENST00000477626 DAZ3Q9NR90 486 aaKnown RBP8.44□□□□□ -1.06
PRPF39-203ENST00000477626 CYSLTR1Q9Y271 337 aa8.44□□□□□ -1.06
PRPF39-203ENST00000477626 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
PRPF39-203ENST00000477626 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
PRPF39-203ENST00000477626 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
PRPF39-203ENST00000477626 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 F5H697 171 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 GAGE7O76087 117 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 GAGE12FP0CL80 117 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 GAGE12GP0CL81 117 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 GAGE12IP0CL82 117 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 TMEM208Q9BTX3 173 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 TSTD3H0UI37 97 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
PRPF39-203ENST00000477626 FAM222AQ5U5X8 452 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 STPG4Q8N801 248 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 OR11H2Q8NH07 326 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 SNHG12Q9BXW3 62 aa8.43□□□□□ -1.06
PRPF39-203ENST00000477626 DNAH2Q9P225 4427 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 K7EIL1 84 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 IGKCP01834 107 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 PLNP26678 52 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 EREGO14944 169 aa8.42□□□□□ -1.06
PRPF39-203ENST00000477626 PCP4L1A6NKN8 68 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 DPM2O94777 84 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 PMVKQ15126 192 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 UQCR10Q9UDW1 63 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 G0S2P27469 103 aa8.41□□□□□ -1.06
PRPF39-203ENST00000477626 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.06
PRPF39-203ENST00000477626 H7C423 109 aa8.4□□□□□ -1.06
PRPF39-203ENST00000477626 UBE2D1P51668 147 aa8.4□□□□□ -1.06
PRPF39-203ENST00000477626 C12orf74Q32Q52 190 aa8.4□□□□□ -1.06
PRPF39-203ENST00000477626 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
PRPF39-203ENST00000477626 TNFRSF18Q9Y5U5 241 aa8.4□□□□□ -1.06
PRPF39-203ENST00000477626 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.07
PRPF39-203ENST00000477626 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
PRPF39-203ENST00000477626 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
PRPF39-203ENST00000477626 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
PRPF39-203ENST00000477626 RETNQ9HD89 108 aa8.39□□□□□ -1.07
PRPF39-203ENST00000477626 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
PRPF39-203ENST00000477626 E9PLD3 99 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 SIVA1O15304 175 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
PRPF39-203ENST00000477626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
PRPF39-203ENST00000477626 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
PRPF39-203ENST00000477626 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms