RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 CEND1Q8N111 149 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 OR4C5Q8NGB2 326 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 ATRQ13535 2644 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 ADARB2-AS1A8MUL3 147 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 RHODO00212 210 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 RS1O15537 224 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 HERVK_113P61574 105 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 Q9UF83 564 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 H3BUT2 72 aa7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 CMC4P56277 68 aaPredicted RBP7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 TAL2Q16559 108 aa7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
HLA-DMB-260ENST00000477537 ZNF815PA8K554 130 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 TMEM170BQ5T4T1 132 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 IGHV3-53P01767 116 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
HLA-DMB-260ENST00000477537 IGLV4-3A0A075B6K6 122 aa7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 TRGV1A0A0A0MS02 117 aa7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 K7ERJ3 54 aa7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 IL17DQ8TAD2 202 aa7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 VCX2Q9H322 139 aa7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.13
HLA-DMB-260ENST00000477537 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 CRLF1O75462 422 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 RPL35AP18077 110 aaKnown RBP7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 RNASE8Q8TDE3 154 aaKnown RBP7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 PLEKHB2Q96CS7 222 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 KRTAP10-3P60369 221 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 SCGB1D4Q6XE38 83 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
HLA-DMB-260ENST00000477537 IGHV3-38A0A0C4DH36 116 aa7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 GIG44P09565 113 aaPredicted RBP7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 TMEM263Q8WUH6 116 aaKnown RBP7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 CHCHD7Q9BUK0 85 aa7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
HLA-DMB-260ENST00000477537 A0A1W2PPM0 123 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 Q6ZTI0 123 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 FAM110AQ9BQ89 295 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 FBN1P35555 2871 aaKnown RBP7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 COTL1Q14019 142 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 NDUFA11Q86Y39 141 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 FAM104AQ969W3 186 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 ZNF479Q96JC4 524 aa7.93□□□□□ -1.14
HLA-DMB-260ENST00000477537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 K7EP34 96 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 PF4P02776 101 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 ZNF22P17026 224 aaPredicted RBP7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 C12orf74Q32Q52 190 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 AMELXQ99217 191 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 NOP10Q9NPE3 64 aaKnown RBP7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 NOTCH3Q9UM47 2321 aa7.92□□□□□ -1.14
HLA-DMB-260ENST00000477537 J3QQQ9 107 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 LEPROTO15243 131 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 LGALS3P17931 250 aaKnown RBP7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 SPANXA1Q9NS26 97 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 UBE2D4Q9Y2X8 147 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 FABP2P12104 132 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 PCP4P48539 62 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 SPCS1Q9Y6A9 102 aa7.91□□□□□ -1.14
HLA-DMB-260ENST00000477537 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 A0A0J9YY99 117 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 K7EQD1 137 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 CRYBA4P53673 196 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 C16orf74Q96GX8 76 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 C1QTNF4Q9BXJ3 329 aa7.9□□□□□ -1.14
HLA-DMB-260ENST00000477537 IGLL5B9A064 214 aa7.9□□□□□ -1.15
HLA-DMB-260ENST00000477537 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.15
HLA-DMB-260ENST00000477537 LINC00482Q8N8I6 264 aa7.9□□□□□ -1.15
HLA-DMB-260ENST00000477537 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.15
HLA-DMB-260ENST00000477537 TRRAPQ9Y4A5 3859 aa7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 GAGE12BA1L429 117 aa7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 PLAC8L1A1L4L8 177 aa7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 MRPS36P82909 103 aaKnown RBP7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 Q6ZUT4 128 aa7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 OR5A1Q8NGJ0 315 aa7.89□□□□□ -1.15
HLA-DMB-260ENST00000477537 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 A0A1B0GWB2 263 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 COL6A5A8TX70 2615 aa7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 RPL36AP83881 106 aaKnown RBP7.88□□□□□ -1.15
HLA-DMB-260ENST00000477537 RPL36ALQ969Q0 106 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms