RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 KLHL30-AS1Q8NEE0 82 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 FAM19A4Q96LR4 140 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 AMELXQ99217 191 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 FAM215AQ9Y5M1 114 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 AGRNO00468 2067 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 TET2Q6N021 2002 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-212ENST00000477520 ROS1P08922 2347 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 ICE1Q9Y2F5 2266 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 DOPEY2Q9Y3R5 2298 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 CADP27708 2225 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 ZNHIT1O43257 154 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV1-17P01599 117 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 IGHV3-9P01782 118 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 ZNF80P51504 273 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-212ENST00000477520 ZNF826PQ6ZT77 177 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 Q6ZT83 130 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 TMEM61Q8N0U2 210 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 DCTN5Q9BTE1 182 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 MSRB1Q9NZV6 116 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 MRPL36Q9P0J6 103 aaKnown RBP3.5□□□□□ -1.85
PTCD3-212ENST00000477520 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
PTCD3-212ENST00000477520 SLC25A15Q9Y619 301 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 PRR14LQ5THK1 2151 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 PLCE1Q9P212 2302 aa3.5□□□□□ -1.85
PTCD3-212ENST00000477520 USP9YO00507 2555 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV2D-30A0A075B6S6 120 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 IGHV7-4-1A0A0J9YVY3 117 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1BA6NDE4 496 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1EA6NEQ0 496 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 USP17L23D6RBM5 183 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 I3L3M4 83 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 NBR2O15453 112 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 DNAL4O96015 105 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 IGLV1-44P01699 117 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1DP0C7P1 496 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 BAALC-AS2P0C853 105 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1A1P0DJD3 496 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1CP0DJD4 496 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RPL35AP18077 110 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 UBE2E1P51965 193 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 ADORA2A-AS1P86434 159 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 DAZ2Q13117 558 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RBMY1FQ15415 496 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 NSUN5P1Q3KNT7 163 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 FBXL19-AS1Q494R0 122 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 C9orf47Q6ZRZ4 202 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 C3orf56Q8N813 242 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 RNASE6Q93091 150 aaKnown RBP3.49□□□□□ -1.85
PTCD3-212ENST00000477520 LINC00477Q96M19 166 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 CCL13Q99616 98 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
PTCD3-212ENST00000477520 TRAV7A0A075B6U4 112 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 TRAV8-3A0A0A6YYJ7 113 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 TRAV26-2A0A0B4J265 109 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 TRAV21A0A0B4J279 112 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 TRBV27A0A0K0K1C4 114 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 E7EUB6 86 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 H0YGX0 51 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 H3BTX0 84 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 LYZL6O75951 148 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 NXPH4O95158 308 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 PLA2G2AP14555 144 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 CFHR3Q02985 330 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 LINC00336Q6ZUF6 198 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 DAZ4Q86SG3 579 aaKnown RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 ZNRF1Q8ND25 227 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 NUP37Q8NFH4 326 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 ITLN2Q8WWU7 325 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 DSCR8Q96T75 97 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 DAZ1Q9NQZ3 744 aaKnown RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 DAZ3Q9NR90 486 aaKnown RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 USF3Q68DE3 2245 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 UBR5O95071 2799 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-212ENST00000477520 PTPN13Q12923 2485 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 AKAP6Q13023 2319 aa3.48□□□□□ -1.85
PTCD3-212ENST00000477520 RAI1Q7Z5J4 1906 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-212ENST00000477520 SPG11Q96JI7 2443 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV2-40A0A087WW87 121 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-212ENST00000477520 TRAV41A0A0B4J266 112 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 TEX22C9J3V5 150 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 H7C2G1 150 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 K7EIM0 57 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV2D-40P01614 121 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-212ENST00000477520 PRSS2P07478 247 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 IGHV1-2P23083 117 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 TIRAPP58753 221 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 FAM27E3Q08E93 113 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 HCP5Q6MZN7 132 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 DYNAPQ8N1N2 210 aa3.47□□□□□ -1.85
PTCD3-212ENST00000477520 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms