RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SCO2A0A1W2PP80 73 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 CXCL1P09341 107 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 OR5AL1P0C617 328 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 COTL1Q14019 142 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 RASL11AQ6T310 242 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 LINC00299Q6ZSB3 139 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 BAGE2Q86Y30 109 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 TCEAL7Q9BRU2 100 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
RTFDC1-206ENST00000477485 LRP2P98164 4655 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 M0QY20 66 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 S100A9P06702 114 aaKnown RBP4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 FHITP49789 147 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 Q5BKY6 102 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 FER1L6-AS1Q8NA97 138 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 FAM213BQ8TBF2 198 aa4.17□□□□□ -1.74
RTFDC1-206ENST00000477485 TRGC1P0CF51 173 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 Q6ZRP5 223 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 OR2D3Q8NGH3 330 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 SFT2D1Q8WV19 159 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 NIT2Q9NQR4 276 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 LINC00474Q9P2X8 69 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 PKIGQ9Y2B9 76 aa4.16□□□□□ -1.74
RTFDC1-206ENST00000477485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 GVQW2A0A096LPI5 108 aaPredicted RBP4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 FAM231BA6NCW3 169 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 ARPC5O15511 151 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 GIPP09681 153 aaPredicted RBP4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 RPL35P42766 123 aaKnown RBP4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 XCL1P47992 114 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 CACNG7P62955 275 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 GAGE2BQ13066 116 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 C21orf62-AS1Q17RA5 79 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 TMUB2Q71RG4 321 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 KCNRGQ8N5I3 272 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 PGLYRP4Q96LB8 373 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 CARD19Q96LW7 228 aa4.15□□□□□ -1.75
RTFDC1-206ENST00000477485 TRAV26-2A0A0B4J265 109 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 H3BS24 57 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 ZNF561-AS1K7EIQ3 104 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 APCSP02743 223 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 MT-ND6P03923 174 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 RPS20P60866 119 aaKnown RBP4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 TWIST1Q15672 202 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 CENPWQ5EE01 88 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 TMEM101Q96IK0 257 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 BTF3L4Q96K17 158 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 MLST8Q9BVC4 326 aa4.14□□□□□ -1.75
RTFDC1-206ENST00000477485 IGHV1-58A0A0C4DH39 117 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 CCL25O15444 150 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 IFNA1P01562 189 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 IGLC6P0CF74 106 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 FGF6P10767 208 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 NTF3P20783 257 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 FOXI1Q12951 378 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 LYZL1Q6UWQ5 148 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 Q6ZNX1 250 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 GNG13Q9P2W3 67 aa4.13□□□□□ -1.75
RTFDC1-206ENST00000477485 F2Z2F3 143 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 MALP21145 153 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 GNG4P50150 75 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 RPL18AQ02543 176 aaKnown RBP4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 SYCNQ0VAF6 134 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 SRSF9Q13242 221 aaKnown RBP eCLIP4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 SS18Q15532 418 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 TNXBP22105 4242 aa4.12□□□□□ -1.75
RTFDC1-206ENST00000477485 LOC107984640A0A0U1RRK4 108 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 RAB19A4D1S5 217 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 BCL2P10415 239 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 PMCHP20382 165 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 CAMPP49913 170 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 PTTG1IPP53801 180 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 SMIM15Q7Z3B0 74 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 OR5A1Q8NGJ0 315 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 ISOC2Q96AB3 205 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 CYTL1Q9NRR1 136 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 PSORS1C2Q9UIG4 136 aa4.11□□□□□ -1.75
RTFDC1-206ENST00000477485 IGLV4-69A0A075B6H9 119 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 SDHAF1A6NFY7 115 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 UMAD1C9J7I0 102 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 SMLR1H3BR10 107 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 H7C423 109 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 NCR2O95944 276 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 ZNF25P17030 456 aaPredicted RBP4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 EIF5AP63241 154 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 PRR4Q16378 134 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 EIF5AL1Q6IS14 154 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms