RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DNAH17Q9UFH2 4485 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 TMEM262E9PQX1 116 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 RTL8CO15255 209 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 APCSP02743 223 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 MPV17L2Q567V2 206 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 Q8N976 141 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.71□□□□□ -0.69
COPS3-207ENST00000477299 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.69
COPS3-207ENST00000477299 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
COPS3-207ENST00000477299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.7□□□□□ -0.7
COPS3-207ENST00000477299 LOC389332A0A1B0GUA5 103 aa10.7□□□□□ -0.7
COPS3-207ENST00000477299 IGKV2-29A2NJV5 120 aaPredicted RBP10.7□□□□□ -0.7
COPS3-207ENST00000477299 AMTP48728 403 aa10.7□□□□□ -0.7
COPS3-207ENST00000477299 MRPL18Q9H0U6 180 aaKnown RBP10.7□□□□□ -0.7
COPS3-207ENST00000477299 VCYO14598 125 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 HLA-DQA1P01909 254 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 PPBPP02775 128 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 C20orf78Q9BR46 151 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 TMEM243Q9BU79 118 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 SMCO4Q9NRQ5 59 aa10.69□□□□□ -0.7
COPS3-207ENST00000477299 PPP1R17O96001 155 aa10.68□□□□□ -0.7
COPS3-207ENST00000477299 FABP9Q0Z7S8 132 aa10.68□□□□□ -0.7
COPS3-207ENST00000477299 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
COPS3-207ENST00000477299 KLK12Q9UKR0 248 aa10.68□□□□□ -0.7
COPS3-207ENST00000477299 TCAPO15273 167 aa10.67□□□□□ -0.7
COPS3-207ENST00000477299 ESDP10768 282 aa10.67□□□□□ -0.7
COPS3-207ENST00000477299 RBX1P62877 108 aa10.67□□□□□ -0.7
COPS3-207ENST00000477299 C1orf134Q5TEV5 83 aa10.67□□□□□ -0.7
COPS3-207ENST00000477299 C6orf223Q8N319 242 aa10.67□□□□□ -0.7
COPS3-207ENST00000477299 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 A0A087WX48 190 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 IBA57-AS1B1ANH7 110 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 PHOX2AO14813 284 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
COPS3-207ENST00000477299 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
COPS3-207ENST00000477299 Q9HAA7 133 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 TRAPPC1Q9Y5R8 145 aa10.66□□□□□ -0.7
COPS3-207ENST00000477299 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
COPS3-207ENST00000477299 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
COPS3-207ENST00000477299 COX19Q49B96 90 aa10.65□□□□□ -0.7
COPS3-207ENST00000477299 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
COPS3-207ENST00000477299 C20orf203Q8NBC4 194 aa10.65□□□□□ -0.7
COPS3-207ENST00000477299 FAT2Q9NYQ8 4349 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 COLCA2A8K830 154 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 ATP6V1G1O75348 118 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 FCER1GP30273 86 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 IFI27P40305 119 aaPredicted RBP10.64□□□□□ -0.71
COPS3-207ENST00000477299 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 ENHOQ6UWT2 76 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 MAP1LC3AQ9H492 121 aa10.64□□□□□ -0.71
COPS3-207ENST00000477299 MT-ND6P03923 174 aa10.63□□□□□ -0.71
COPS3-207ENST00000477299 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
COPS3-207ENST00000477299 KIR2DL4Q99706 377 aa10.63□□□□□ -0.71
COPS3-207ENST00000477299 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
COPS3-207ENST00000477299 UBE2L6O14933 153 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 FGF6P10767 208 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 RPL39P62891 51 aaKnown RBP10.62□□□□□ -0.71
COPS3-207ENST00000477299 TNP2Q05952 138 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 Q8N8P6 123 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 BIRC6Q9NR09 4857 aa10.62□□□□□ -0.71
COPS3-207ENST00000477299 RNASEKQ6P5S7 137 aaKnown RBP10.61□□□□□ -0.71
COPS3-207ENST00000477299 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
COPS3-207ENST00000477299 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
COPS3-207ENST00000477299 K7EP13 123 aa10.6□□□□□ -0.71
COPS3-207ENST00000477299 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
COPS3-207ENST00000477299 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
COPS3-207ENST00000477299 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
COPS3-207ENST00000477299 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
COPS3-207ENST00000477299 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
COPS3-207ENST00000477299 PRSS29PA6NIE9 313 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 H7C423 109 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 TRGC2P03986 189 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 LAGE3Q14657 143 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
COPS3-207ENST00000477299 C18orf32Q8TCD1 76 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
COPS3-207ENST00000477299 PKD1P98161 4303 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 RAB5AP20339 215 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 PKIAP61925 76 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 REG3AQ06141 175 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 PRR34Q9NV39 138 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
COPS3-207ENST00000477299 IGLV10-54A0A075B6I4 117 aa10.56□□□□□ -0.72
COPS3-207ENST00000477299 IGKV2D-24A0A075B6R9 120 aa10.56□□□□□ -0.72
COPS3-207ENST00000477299 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
COPS3-207ENST00000477299 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
COPS3-207ENST00000477299 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
COPS3-207ENST00000477299 S100A1P23297 94 aa10.55□□□□□ -0.72
COPS3-207ENST00000477299 FUSP35637 526 aaKnown RBP eCLIP10.55□□□□□ -0.72
COPS3-207ENST00000477299 WFDC2Q14508 124 aa10.55□□□□□ -0.72
COPS3-207ENST00000477299 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
COPS3-207ENST00000477299 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
COPS3-207ENST00000477299 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms