RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 FAM231DQ6ZW35 169 aa13.95□□□□□ -0.18
LIMK1-204ENST00000476792 UBE2L6O14933 153 aa13.94□□□□□ -0.18
LIMK1-204ENST00000476792 C20orf203Q8NBC4 194 aa13.94□□□□□ -0.18
LIMK1-204ENST00000476792 RPL39LQ96EH5 51 aaKnown RBP13.94□□□□□ -0.18
LIMK1-204ENST00000476792 FAM210AQ96ND0 272 aa13.94□□□□□ -0.18
LIMK1-204ENST00000476792 IGLV4-60A0A075B6I1 120 aa13.93□□□□□ -0.18
LIMK1-204ENST00000476792 ZNF727A8MUV8 499 aa13.93□□□□□ -0.18
LIMK1-204ENST00000476792 SRP19P09132 144 aaKnown RBP13.92□□□□□ -0.18
LIMK1-204ENST00000476792 SCXQ7RTU7 201 aa13.92□□□□□ -0.18
LIMK1-204ENST00000476792 LINC01551Q86U37 167 aa13.92□□□□□ -0.18
LIMK1-204ENST00000476792 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
LIMK1-204ENST00000476792 GFRA4Q9GZZ7 299 aa13.92□□□□□ -0.18
LIMK1-204ENST00000476792 PRSS1P07477 247 aa13.91□□□□□ -0.18
LIMK1-204ENST00000476792 KRTAP26-1Q6PEX3 210 aa13.91□□□□□ -0.18
LIMK1-204ENST00000476792 FLG2Q5D862 2391 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-204ENST00000476792 A0A1B0GUV1 79 aa13.9□□□□□ -0.18
LIMK1-204ENST00000476792 LINC00528Q8N1L1 170 aa13.9□□□□□ -0.18
LIMK1-204ENST00000476792 CT83Q5H943 113 aa13.89□□□□□ -0.19
LIMK1-204ENST00000476792 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 HIGD1CA8MV81 97 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 TEX261Q6UWH6 196 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 CHAC1Q9BUX1 264 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 OSTCQ9NRP0 149 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 DNAH8Q96JB1 4490 aa13.87□□□□□ -0.19
LIMK1-204ENST00000476792 TRAV8-4A0A0B4J246 113 aa13.86□□□□□ -0.19
LIMK1-204ENST00000476792 SDHAF1A6NFY7 115 aa13.86□□□□□ -0.19
LIMK1-204ENST00000476792 NDUFS6O75380 124 aaKnown RBP13.86□□□□□ -0.19
LIMK1-204ENST00000476792 PLA2G1BP04054 148 aaKnown RBP13.86□□□□□ -0.19
LIMK1-204ENST00000476792 AMMECR1LQ6DCA0 310 aa13.86□□□□□ -0.19
LIMK1-204ENST00000476792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-204ENST00000476792 A0A1B0GUT8 65 aa13.85□□□□□ -0.19
LIMK1-204ENST00000476792 IGKV2-29A2NJV5 120 aaPredicted RBP13.85□□□□□ -0.19
LIMK1-204ENST00000476792 GAS8-AS1O95177 125 aa13.85□□□□□ -0.19
LIMK1-204ENST00000476792 CIRBP-AS1Q8TBR5 109 aa13.85□□□□□ -0.19
LIMK1-204ENST00000476792 APCSP02743 223 aa13.84□□□□□ -0.19
LIMK1-204ENST00000476792 PMCHP20382 165 aa13.84□□□□□ -0.19
LIMK1-204ENST00000476792 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
LIMK1-204ENST00000476792 RNASEKQ6P5S7 137 aaKnown RBP13.84□□□□□ -0.19
LIMK1-204ENST00000476792 hDV102S1A0JD36 115 aa13.83□□□□□ -0.2
LIMK1-204ENST00000476792 NCR2O95944 276 aa13.83□□□□□ -0.2
LIMK1-204ENST00000476792 DGAT2L7PQ6IED9 249 aa13.83□□□□□ -0.2
LIMK1-204ENST00000476792 SRRM2Q9UQ35 2752 aaKnown RBP13.82□□□□□ -0.2
LIMK1-204ENST00000476792 C9JQL5 133 aa13.82□□□□□ -0.2
LIMK1-204ENST00000476792 I3L3M4 83 aa13.82□□□□□ -0.2
LIMK1-204ENST00000476792 CLRN3Q8NCR9 226 aa13.82□□□□□ -0.2
LIMK1-204ENST00000476792 V9GYV3 84 aa13.82□□□□□ -0.2
LIMK1-204ENST00000476792 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 ADIRFQ15847 76 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 C9orf163Q8N9P6 203 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 ISOC2Q96AB3 205 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 TMEM191AQ9H0A3 160 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 ST20Q9HBF5 79 aa13.81□□□□□ -0.2
LIMK1-204ENST00000476792 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
LIMK1-204ENST00000476792 FGF6P10767 208 aa13.8□□□□□ -0.2
LIMK1-204ENST00000476792 RPL23P62829 140 aaKnown RBP13.8□□□□□ -0.2
LIMK1-204ENST00000476792 SRSF3P84103 164 aaKnown RBP13.8□□□□□ -0.2
LIMK1-204ENST00000476792 FAM74A3Q4VXF1 159 aa13.8□□□□□ -0.2
LIMK1-204ENST00000476792 TMEM242Q9NWH2 141 aa13.8□□□□□ -0.2
LIMK1-204ENST00000476792 VPS13BQ7Z7G8 4022 aa13.79□□□□□ -0.2
LIMK1-204ENST00000476792 DMBT1Q9UGM3 2413 aaPredicted RBP13.79□□□□□ -0.2
LIMK1-204ENST00000476792 TRBV6-5A0A0K0K1A5 114 aa13.79□□□□□ -0.2
LIMK1-204ENST00000476792 RAB4AP20338 218 aa13.79□□□□□ -0.2
LIMK1-204ENST00000476792 RPS10P46783 165 aaKnown RBP13.79□□□□□ -0.2
LIMK1-204ENST00000476792 RIGQ13278 110 aa13.79□□□□□ -0.2
LIMK1-204ENST00000476792 NUP35Q8NFH5 326 aa13.79□□□□□ -0.2
LIMK1-204ENST00000476792 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
LIMK1-204ENST00000476792 PEA15Q15121 130 aa13.78□□□□□ -0.2
LIMK1-204ENST00000476792 AP5S1Q9NUS5 200 aa13.78□□□□□ -0.2
LIMK1-204ENST00000476792 H7C423 109 aa13.77□□□□□ -0.21
LIMK1-204ENST00000476792 TSHBP01222 138 aa13.77□□□□□ -0.21
LIMK1-204ENST00000476792 MRAP2Q96G30 205 aa13.77□□□□□ -0.21
LIMK1-204ENST00000476792 NAT8Q9UHE5 227 aa13.77□□□□□ -0.21
LIMK1-204ENST00000476792 CHCHD10Q8WYQ3 142 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-204ENST00000476792 NAT8BQ9UHF3 227 aa13.76□□□□□ -0.21
LIMK1-204ENST00000476792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-204ENST00000476792 TMEM101Q96IK0 257 aa13.75□□□□□ -0.21
LIMK1-204ENST00000476792 BTF3L4Q96K17 158 aa13.75□□□□□ -0.21
LIMK1-204ENST00000476792 SLPIP03973 132 aa13.74□□□□□ -0.21
LIMK1-204ENST00000476792 CNBPP62633 177 aaKnown RBP13.74□□□□□ -0.21
LIMK1-204ENST00000476792 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
LIMK1-204ENST00000476792 PANO1I0J062 215 aa13.73□□□□□ -0.21
LIMK1-204ENST00000476792 ESDP10768 282 aa13.73□□□□□ -0.21
LIMK1-204ENST00000476792 ZNF25P17030 456 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-204ENST00000476792 POLR2KP53803 58 aaKnown RBP13.73□□□□□ -0.21
LIMK1-204ENST00000476792 HIGD2BQ4VC39 106 aa13.73□□□□□ -0.21
LIMK1-204ENST00000476792 CFAP161Q6P656 301 aa13.73□□□□□ -0.21
LIMK1-204ENST00000476792 OR5A1Q8NGJ0 315 aa13.73□□□□□ -0.21
LIMK1-204ENST00000476792 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-204ENST00000476792 J3QL48 77 aa13.72□□□□□ -0.21
LIMK1-204ENST00000476792 CAMPP49913 170 aa13.72□□□□□ -0.21
LIMK1-204ENST00000476792 C15orf56Q8N910 161 aa13.72□□□□□ -0.21
LIMK1-204ENST00000476792 DPH3Q96FX2 82 aa13.71□□□□□ -0.21
LIMK1-204ENST00000476792 IGHV3-64A0A075B6Q5 118 aa13.7□□□□□ -0.22
LIMK1-204ENST00000476792 TRBV27A0A0K0K1C4 114 aa13.7□□□□□ -0.22
LIMK1-204ENST00000476792 SMIM27A0A1W2PRY6 76 aa13.7□□□□□ -0.22
LIMK1-204ENST00000476792 VCYO14598 125 aa13.7□□□□□ -0.22
LIMK1-204ENST00000476792 FCER1GP30273 86 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms