RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ACY3Q96HD9 319 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 PRRT1Q99946 306 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM208Q9BTX3 173 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 PDCD10Q9BUL8 212 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 MRPS26Q9BYN8 205 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 RSL24D1Q9UHA3 163 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 APLNQ9ULZ1 77 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 U3KQ87 197 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 DEFB131BA0A096LNP1 70 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 TRAV10A0A0B4J240 114 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 A0A0G2JQZ4 141 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 FABP12A6NFH5 140 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SMIM9A6NGZ8 99 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SNRPGP15A8MWD9 76 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 H3BPC8 53 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 PITX3O75364 302 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 LINC00313P59037 77 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 DEFB1P60022 68 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF90Q03938 601 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SMCO1Q147U7 214 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 PSMG4Q5JS54 123 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 C1orf194Q5T5A4 169 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SPATA31B1PQ5VZV4 182 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SCGB1D4Q6XE38 83 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 RAB2BQ8WUD1 216 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 SCP2D1Q9UJQ7 156 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 FAT1Q14517 4588 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 HSPG2P98160 4391 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
PTCD3-211ENST00000476215 PCLOQ9Y6V0 5065 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 PIGBOS1A0A0B4J2F0 54 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 GRIFINA4D1Z8 144 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 TMEM189A5PLL7 270 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF705FA8MVS1 300 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 SMLR1H3BR10 107 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 CFDP00746 253 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 FABP1P07148 127 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF705DP0CH99 300 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF705BP0CI00 300 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 SPART-AS1P0CW21 52 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 IAPPP10997 89 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 SLC25A6P12236 298 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 HLA-DRB4P13762 266 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 HINT1P49773 126 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 EMP1P54849 157 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 FXYD7P58549 80 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 PSG9Q00887 426 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 OR2F1Q13607 317 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 TMEM128Q5BJH2 165 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 GDF5OSQ5U4N7 250 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 FAM78BQ5VT40 261 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 ZNF705AQ6ZN79 300 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 FOXI2Q6ZQN5 318 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 BOD1L2Q8IYS8 172 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 OR8I2Q8N0Y5 310 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 C1orf158Q8N1D5 194 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 OR4B1Q8NGF8 309 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 MCFD2Q8NI22 146 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 PPP1R14BQ96C90 147 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 CIB3Q96Q77 187 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 TRGV9Q99603 122 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 SLC25A21Q9BQT8 299 aaPredicted RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 Q9BRP9 147 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 PBDC1Q9BVG4 233 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 EIF5A2Q9GZV4 153 aaKnown RBP1.7□□□□□ -2.14
PTCD3-211ENST00000476215 SLC35B3Q9H1N7 401 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 RPRMQ9NS64 109 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 HLA-DRB4X5D2U9 266 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 DNAH8Q96JB1 4490 aa1.7□□□□□ -2.14
PTCD3-211ENST00000476215 DUXBA0A1W2PPF3 345 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 C9orf170A2RU37 121 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 A8MTW9 85 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 FAM25EA8MYX2 175 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 HSBP1L1C9JCN9 74 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 M0R2N4 97 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 HYPMO75409 117 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 SFT2D2O95562 160 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 IFNA21P01568 189 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 PRM2P04554 102 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 FAUP35544 74 aaKnown RBP1.69□□□□□ -2.14
PTCD3-211ENST00000476215 AP3S2P59780 193 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 DAD1P61803 113 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 PPP1R1AQ13522 171 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 LGALS9BQ3B8N2 356 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 SPANXN5Q5MJ07 72 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 SAMD13Q5VXD3 122 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 AMTNQ6UX39 209 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 C2orf91Q6ZV80 131 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 TMED4Q7Z7H5 227 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 TOMM5Q8N4H5 51 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 C7orf50Q9BRJ6 194 aaKnown RBP1.69□□□□□ -2.14
PTCD3-211ENST00000476215 DOK5Q9P104 306 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 PAIP2BQ9ULR5 123 aaKnown RBP1.69□□□□□ -2.14
PTCD3-211ENST00000476215 HERC1Q15751 4861 aa1.69□□□□□ -2.14
PTCD3-211ENST00000476215 MUC4Q99102 2169 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 VPS13BQ7Z7G8 4022 aa1.68□□□□□ -2.14
PTCD3-211ENST00000476215 NAP1L6A6NFF2 107 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms