RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 HTN1P15515 57 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 GAGE2BQ13066 116 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 ZNF56Q15929 161 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 C11orf44Q8N8P7 122 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
VARS2-207ENST00000476162 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
VARS2-207ENST00000476162 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
VARS2-207ENST00000476162 SDHAF1A6NFY7 115 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 VCYO14598 125 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
VARS2-207ENST00000476162 NF1P21359 2839 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 M0QY20 66 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 DEFB114Q30KQ6 69 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
VARS2-207ENST00000476162 AKAP9Q99996 3911 aa11.73□□□□□ -0.53
VARS2-207ENST00000476162 A8MTW9 85 aa11.73□□□□□ -0.53
VARS2-207ENST00000476162 UBE2D1P51668 147 aa11.73□□□□□ -0.53
VARS2-207ENST00000476162 CUBNO60494 3623 aa11.73□□□□□ -0.53
VARS2-207ENST00000476162 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 A8MWV9 139 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 TP53TG1Q9Y2A0 90 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 PRM2P04554 102 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 IFITM1P13164 125 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 PDZD2O15018 2839 aa11.72□□□□□ -0.53
VARS2-207ENST00000476162 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
VARS2-207ENST00000476162 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
VARS2-207ENST00000476162 TTC32Q5I0X7 151 aa11.71□□□□□ -0.53
VARS2-207ENST00000476162 SFTA2Q6UW10 78 aa11.71□□□□□ -0.53
VARS2-207ENST00000476162 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.53
VARS2-207ENST00000476162 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
VARS2-207ENST00000476162 TCL1BO95988 128 aa11.71□□□□□ -0.54
VARS2-207ENST00000476162 PLA2G2AP14555 144 aa11.71□□□□□ -0.54
VARS2-207ENST00000476162 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.54
VARS2-207ENST00000476162 Q6Q795 121 aa11.71□□□□□ -0.54
VARS2-207ENST00000476162 ACANP16112 2415 aa11.71□□□□□ -0.54
VARS2-207ENST00000476162 IGIPA6NJ69 53 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 TSHBP01222 138 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 LYRM7Q5U5X0 104 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 SNCGO76070 127 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 YAE1D1Q9NRH1 226 aa11.7□□□□□ -0.54
VARS2-207ENST00000476162 J3QKU1 62 aa11.69□□□□□ -0.54
VARS2-207ENST00000476162 CRLF1O75462 422 aa11.69□□□□□ -0.54
VARS2-207ENST00000476162 CD28P10747 220 aa11.69□□□□□ -0.54
VARS2-207ENST00000476162 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
VARS2-207ENST00000476162 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
VARS2-207ENST00000476162 IGHV3-73A0A0B4J1V6 119 aa11.67□□□□□ -0.54
VARS2-207ENST00000476162 CCL24O00175 119 aa11.67□□□□□ -0.54
VARS2-207ENST00000476162 WNK1Q9H4A3 2382 aa11.67□□□□□ -0.54
VARS2-207ENST00000476162 HELZ2Q9BYK8 2649 aaKnown RBP11.66□□□□□ -0.54
VARS2-207ENST00000476162 CITED2Q99967 270 aaPredicted RBP11.66□□□□□ -0.54
VARS2-207ENST00000476162 PROK1P58294 105 aa11.66□□□□□ -0.54
VARS2-207ENST00000476162 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
VARS2-207ENST00000476162 TIMM17AQ99595 171 aa11.66□□□□□ -0.54
VARS2-207ENST00000476162 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
VARS2-207ENST00000476162 M0QXV9 152 aa11.65□□□□□ -0.54
VARS2-207ENST00000476162 EMP1P54849 157 aa11.65□□□□□ -0.54
VARS2-207ENST00000476162 PMVKQ15126 192 aa11.65□□□□□ -0.54
VARS2-207ENST00000476162 ODF3L2Q3SX64 289 aa11.65□□□□□ -0.54
VARS2-207ENST00000476162 LINC01587Q99440 93 aa11.65□□□□□ -0.54
VARS2-207ENST00000476162 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 M0R2P5 195 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 SCGB1C2P0DMR2 95 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 MTORP42345 2549 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 P0DMU3 169 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 NSUN5P1Q3KNT7 163 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 MEIG1Q5JSS6 88 aa11.64□□□□□ -0.55
VARS2-207ENST00000476162 C11orf86A6NJI1 115 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 I3L3M4 83 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 RHOHQ15669 191 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 PRADC1Q9BSG0 188 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 PPDPFQ9H3Y8 114 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
VARS2-207ENST00000476162 RNASE1P07998 156 aaKnown RBP11.63□□□□□ -0.55
VARS2-207ENST00000476162 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
VARS2-207ENST00000476162 INSP01308 110 aa11.62□□□□□ -0.55
VARS2-207ENST00000476162 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
VARS2-207ENST00000476162 C11orf72Q8NBR9 251 aa11.62□□□□□ -0.55
VARS2-207ENST00000476162 SLC25A20O43772 301 aa11.62□□□□□ -0.55
VARS2-207ENST00000476162 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
VARS2-207ENST00000476162 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
VARS2-207ENST00000476162 XCL2Q9UBD3 114 aa11.62□□□□□ -0.55
VARS2-207ENST00000476162 C20orf203Q8NBC4 194 aa11.61□□□□□ -0.55
VARS2-207ENST00000476162 UNC79Q9P2D8 2635 aa11.61□□□□□ -0.55
VARS2-207ENST00000476162 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 Q6ZSN1 163 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms