RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TRBV7-3A0A075B6L6 115 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 IGHV4-28A0A0C4DH34 117 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 H3BNG1 76 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 NPYP01303 97 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 GATA1P15976 413 aaPredicted RBP4.99□□□□□ -1.61
SHQ1-207ENST00000475558 EMP1P54849 157 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 FAM222AQ5U5X8 452 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 Q6ZTI0 123 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 Q8NAQ8 132 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 JPT2Q9H910 190 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 MRPL16Q9NX20 251 aaKnown RBP4.99□□□□□ -1.61
SHQ1-207ENST00000475558 HERC2O95714 4834 aa4.99□□□□□ -1.61
SHQ1-207ENST00000475558 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 LOC389332A0A1B0GUA5 103 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 SDHAF1A6NFY7 115 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 SERF1AO75920 110 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 ATP5LO75964 103 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 PRM2P04554 102 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 NPSP0C0P6 89 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 DEFB130BP0DP73 79 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 DEFB130AP0DP74 79 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 FCER1GP30273 86 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
SHQ1-207ENST00000475558 FHL2Q14192 279 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 PAPPA-AS1Q5QFB9 102 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 RNASEKQ6P5S7 137 aaKnown RBP4.98□□□□□ -1.61
SHQ1-207ENST00000475558 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 TMEM70Q9BUB7 260 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 SMIM2Q9BVW6 85 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
SHQ1-207ENST00000475558 FRAS1Q86XX4 4008 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 H7C423 109 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 K7EQD1 137 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 LEPROTL1O95214 131 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 HBDP02042 147 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 AMTP48728 403 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 CRYBA4P53673 196 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 PKIAP61925 76 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 LINC00476Q8WZB0 136 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 ZNF479Q96JC4 524 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 MAP1LC3CQ9BXW4 147 aa4.97□□□□□ -1.61
SHQ1-207ENST00000475558 AGRNO00468 2067 aa4.96□□□□□ -1.61
SHQ1-207ENST00000475558 IGLV2-18A0A075B6J9 118 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 TRAV26-1A0A087WT03 109 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 TRAV26-2A0A0B4J265 109 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 C20orf202A1L168 122 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 SMKR1H3BMG3 65 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 LY6G6CO95867 125 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 NUDT3O95989 172 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 COTL1Q14019 142 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 MRPL23Q16540 153 aaKnown RBP4.96□□□□□ -1.62
SHQ1-207ENST00000475558 SPATA12Q7Z6I5 190 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 SLC25A29Q8N8R3 303 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 ZNRF2Q8NHG8 242 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 C11orf45Q8TAV5 145 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 TMEM141Q96I45 108 aa4.96□□□□□ -1.62
SHQ1-207ENST00000475558 IGHV3-73A0A0B4J1V6 119 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 FABP4P15090 132 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
SHQ1-207ENST00000475558 IQCJQ1A5X6 159 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 PET117Q6UWS5 81 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 ERASQ7Z444 233 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 HIST1H2BLQ99880 126 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 RETNQ9HD89 108 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 CYSLTR1Q9Y271 337 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 PYGO1Q9Y3Y4 419 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 RYR1P21817 5038 aa4.95□□□□□ -1.62
SHQ1-207ENST00000475558 LOC105371267A0A1B0GV96 52 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.94□□□□□ -1.62
SHQ1-207ENST00000475558 TIRAPP58753 221 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 UBE2D3P61077 147 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 UBE2D2P62837 147 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 PMCHL1Q16048 86 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 ATP6V0E2Q8NHE4 81 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 TOMM6Q96B49 74 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
SHQ1-207ENST00000475558 SCGB3A1Q96QR1 104 aa4.94□□□□□ -1.62
SHQ1-207ENST00000475558 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
SHQ1-207ENST00000475558 TRAV10A0A0B4J240 114 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 IGHV1-24A0A0C4DH33 117 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 F5H768 121 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 NUPR1O60356 82 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 PRSS1P07477 247 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 JOSD1Q15040 202 aaPredicted RBP4.93□□□□□ -1.62
SHQ1-207ENST00000475558 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 PDZD11Q5EBL8 140 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 Q6ZN92 141 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 Q6ZSN1 163 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 NEGR1Q7Z3B1 354 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 FAM19A2Q8N3H0 131 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 OR10D4PQ8NGN7 298 aa4.93□□□□□ -1.62
SHQ1-207ENST00000475558 IFI27L1Q96BM0 104 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms