RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 Q6ZR54 194 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 HIST1H2BLQ99880 126 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 SDHAF1A6NFY7 115 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 K7EQD1 137 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 NUPR1O60356 82 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 PRADC1Q9BSG0 188 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 TMEM70Q9BUB7 260 aa10.88□□□□□ -0.67
CPSF3-203ENST00000475482 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
CPSF3-203ENST00000475482 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
CPSF3-203ENST00000475482 POLR2KP53803 58 aaKnown RBP10.87□□□□□ -0.67
CPSF3-203ENST00000475482 RPL36AP83881 106 aaKnown RBP10.87□□□□□ -0.67
CPSF3-203ENST00000475482 LAGE3Q14657 143 aa10.87□□□□□ -0.67
CPSF3-203ENST00000475482 RHOHQ15669 191 aa10.87□□□□□ -0.67
CPSF3-203ENST00000475482 RPL36ALQ969Q0 106 aaKnown RBP10.87□□□□□ -0.67
CPSF3-203ENST00000475482 IGLV2-18A0A075B6J9 118 aa10.86□□□□□ -0.67
CPSF3-203ENST00000475482 F5H768 121 aa10.86□□□□□ -0.67
CPSF3-203ENST00000475482 I3L3M4 83 aa10.86□□□□□ -0.67
CPSF3-203ENST00000475482 RTL8CO15255 209 aa10.86□□□□□ -0.67
CPSF3-203ENST00000475482 AKR1D1P51857 326 aa10.86□□□□□ -0.67
CPSF3-203ENST00000475482 IGHV1-24A0A0C4DH33 117 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 A0A1B0GVY2 172 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 HBDP02042 147 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 FCER1GP30273 86 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 FHL2Q14192 279 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 FAM19A2Q8N3H0 131 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 SLC25A29Q8N8R3 303 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 HSPB8Q9UJY1 196 aa10.85□□□□□ -0.67
CPSF3-203ENST00000475482 TRBV7-3A0A075B6L6 115 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 Q6ZSN1 163 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 HERC2O95714 4834 aa10.84□□□□□ -0.67
CPSF3-203ENST00000475482 IFITM10A6NMD0 228 aa10.83□□□□□ -0.68
CPSF3-203ENST00000475482 M0R2N4 97 aa10.83□□□□□ -0.68
CPSF3-203ENST00000475482 NUDT3O95989 172 aa10.83□□□□□ -0.68
CPSF3-203ENST00000475482 DAZ4Q86SG3 579 aaKnown RBP10.83□□□□□ -0.68
CPSF3-203ENST00000475482 OR10D4PQ8NGN7 298 aa10.83□□□□□ -0.68
CPSF3-203ENST00000475482 DAZ3Q9NR90 486 aaKnown RBP10.83□□□□□ -0.68
CPSF3-203ENST00000475482 DNAH11Q96DT5 4516 aa10.82□□□□□ -0.68
CPSF3-203ENST00000475482 ZNRF2Q8NHG8 242 aa10.82□□□□□ -0.68
CPSF3-203ENST00000475482 PKHD1P08F94 4074 aa10.82□□□□□ -0.68
CPSF3-203ENST00000475482 PKD1P98161 4303 aa10.82□□□□□ -0.68
CPSF3-203ENST00000475482 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
CPSF3-203ENST00000475482 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
CPSF3-203ENST00000475482 H3BNG1 76 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
CPSF3-203ENST00000475482 CRYBA4P53673 196 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 COTL1Q14019 142 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 TMEM97Q5BJF2 176 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 LINC00588Q9Y4M8 146 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 KIAA1109Q2LD37 5005 aa10.8□□□□□ -0.68
CPSF3-203ENST00000475482 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 PRSS29PA6NIE9 313 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 PAX4O43316 350 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 ATP5LO75964 103 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 UBE2D3P61077 147 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 UBE2D2P62837 147 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 MAP1LC3CQ9BXW4 147 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 CYSLTR1Q9Y271 337 aa10.79□□□□□ -0.68
CPSF3-203ENST00000475482 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 TSHBP01222 138 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 CCL18P55774 89 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 GAGE1Q13065 139 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 GAGE4Q13068 117 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 GAGE5Q13069 117 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 GAGE13Q4V321 117 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 NEGR1Q7Z3B1 354 aa10.78□□□□□ -0.68
CPSF3-203ENST00000475482 A0A096LNJ9 63 aa10.77□□□□□ -0.69
CPSF3-203ENST00000475482 KRTDAPP60985 99 aa10.77□□□□□ -0.69
CPSF3-203ENST00000475482 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
CPSF3-203ENST00000475482 SH2D6Q7Z4S9 175 aa10.77□□□□□ -0.69
CPSF3-203ENST00000475482 TOMM6Q96B49 74 aa10.77□□□□□ -0.69
CPSF3-203ENST00000475482 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
CPSF3-203ENST00000475482 GYPEP15421 78 aa10.76□□□□□ -0.69
CPSF3-203ENST00000475482 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
CPSF3-203ENST00000475482 VSIG2Q96IQ7 327 aa10.76□□□□□ -0.69
CPSF3-203ENST00000475482 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
CPSF3-203ENST00000475482 C20orf202A1L168 122 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.75□□□□□ -0.69
CPSF3-203ENST00000475482 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 C1orf134Q5TEV5 83 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 IFI27L1Q96BM0 104 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 UPK3BQ9BT76 320 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 Q9UF83 564 aa10.75□□□□□ -0.69
CPSF3-203ENST00000475482 A0A0J9YY99 117 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 JOSD1Q15040 202 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-203ENST00000475482 ESRGQ1W209 222 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 ERASQ7Z444 233 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 C20orf203Q8NBC4 194 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
CPSF3-203ENST00000475482 A0A096LPF7 62 aa10.73□□□□□ -0.69
CPSF3-203ENST00000475482 IGHV3-38A0A0C4DH36 116 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms