RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 HIST1H1DP16402 221 aaKnown RBP-0.1□□□□□ -2.43
LTN1-204ENST00000475344 CCL8P80075 99 aa-0.1□□□□□ -2.43
LTN1-204ENST00000475344 TCEAL4Q96EI5 215 aa-0.1□□□□□ -2.43
LTN1-204ENST00000475344 PFDN5Q99471 154 aa-0.1□□□□□ -2.43
LTN1-204ENST00000475344 FLNAP21333 2647 aaKnown RBP-0.1□□□□□ -2.43
LTN1-204ENST00000475344 ZNF236Q9UL36 1845 aa-0.1□□□□□ -2.43
LTN1-204ENST00000475344 CASKIN1Q8WXD9 1431 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 MYCBP2O75592 4640 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 TRBV10-3A0A0K0K1G6 114 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 Q5VV11 94 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 BAGE3Q86Y29 109 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 BICRAQ9NZM4 1560 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 MYO7BQ6PIF6 2116 aa-0.11□□□□□ -2.43
LTN1-204ENST00000475344 LRRC37A3O60309 1634 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 PHLPP1O60346 1717 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 ARAP2Q8WZ64 1704 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 ARPC4P59998 168 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 ZNF518AQ6AHZ1 1483 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 KDM3BQ7LBC6 1761 aa-0.12□□□□□ -2.43
LTN1-204ENST00000475344 MYOM3Q5VTT5 1437 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 GOLGA4Q13439 2230 aaKnown RBP-0.13□□□□□ -2.43
LTN1-204ENST00000475344 IFT140Q96RY7 1462 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 BSNQ9UPA5 3926 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 HCG22E2RYF7 251 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 SIX6O95475 246 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 IFITM1P13164 125 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 RBM3P98179 157 aaKnown RBP-0.13□□□□□ -2.43
LTN1-204ENST00000475344 CFAP126Q5VTH2 177 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 PDCD10Q9BUL8 212 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 CYP4F30PQ9H0H9 118 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 CCDC167Q9P0B6 97 aa-0.13□□□□□ -2.43
LTN1-204ENST00000475344 MAP1BP46821 2468 aaKnown RBP-0.13□□□□□ -2.43
LTN1-204ENST00000475344 HSPG2P98160 4391 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 GRIN2AQ12879 1464 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 NEBP20929 6669 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 SMIM6P0DI80 62 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 CCL18P55774 89 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 LSM10Q969L4 123 aaKnown RBP-0.14□□□□□ -2.43
LTN1-204ENST00000475344 CSPG4Q6UVK1 2322 aa-0.14□□□□□ -2.43
LTN1-204ENST00000475344 ATRQ13535 2644 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 PIN1P1O15428 100 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 PPP1R17O96001 155 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 SPINK8P0C7L1 97 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 AGPAT4-IT1Q9H0P7 198 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 NPVFQ9HCQ7 196 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 PRO0255Q9UI72 69 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 PSME4Q14997 1843 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 ZFHX3Q15911 3703 aa-0.15□□□□□ -2.43
LTN1-204ENST00000475344 BIVM-ERCC5R4GMW8 1640 aa-0.16□□□□□ -2.43
LTN1-204ENST00000475344 LPAP08519 4548 aa-0.16□□□□□ -2.43
LTN1-204ENST00000475344 TNXBP22105 4242 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 TRAV13-2A0A0B4J235 113 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 A0A0D9SFI3 127 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 NDUFA2O43678 99 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 GNG7O60262 68 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
LTN1-204ENST00000475344 C10orf128Q5T292 105 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 Q8N8P6 123 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 CNFNQ9BYD5 112 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 SCN3BQ9NY72 215 aa-0.16□□□□□ -2.44
LTN1-204ENST00000475344 PAIP2BQ9ULR5 123 aaKnown RBP-0.16□□□□□ -2.44
LTN1-204ENST00000475344 SPTA1P02549 2419 aa-0.17□□□□□ -2.44
LTN1-204ENST00000475344 SPAARA0A1B0GVQ0 90 aa-0.17□□□□□ -2.44
LTN1-204ENST00000475344 M0R135 149 aa-0.17□□□□□ -2.44
LTN1-204ENST00000475344 LINC00470Q9BZP3 86 aa-0.17□□□□□ -2.44
LTN1-204ENST00000475344 MRC1P22897 1456 aa-0.17□□□□□ -2.44
LTN1-204ENST00000475344 TCHHQ07283 1943 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 HECTD4Q9Y4D8 3996 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 SELENOWP63302 87 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 CCDC58Q4VC31 144 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 MEIG1Q5JSS6 88 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 R4GMQ9 66 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 LAMC1P11047 1609 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 CFTRP13569 1480 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 PXDNQ92626 1479 aa-0.18□□□□□ -2.44
LTN1-204ENST00000475344 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 ZNF609O15014 1411 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 NHSL1Q5SYE7 1610 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 BCE1O60756 84 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 SPAG11BQ08648 103 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 SPAG11AQ6PDA7 123 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 TTC9CQ8N5M4 171 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 ARL11Q969Q4 196 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 AQP10Q96PS8 301 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 RERGLQ9H628 205 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 SERP1Q9Y6X1 66 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 LRP2P98164 4655 aa-0.19□□□□□ -2.44
LTN1-204ENST00000475344 SBF2Q86WG5 1849 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 TENM2Q9NT68 2774 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 ALMS1Q8TCU4 4167 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 CTXND1A0A1B0GTU2 59 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 FAM25AB3EWG3 89 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 FAM25CB3EWG5 89 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 FAM25GB3EWG6 89 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 M0R3E3 92 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 HAMPP81172 84 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 Q6AWC8 147 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 COPS9Q8WXC6 57 aa-0.2□□□□□ -2.44
LTN1-204ENST00000475344 SNRNP25Q9BV90 132 aaKnown RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms