RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 PNRC1Q12796 327 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-216ENST00000475195 GAGE6Q13070 117 aa10.9□□□□□ -0.66
ATG4B-216ENST00000475195 AMN1Q8IY45 258 aa10.9□□□□□ -0.66
ATG4B-216ENST00000475195 NTN5Q8WTR8 489 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-216ENST00000475195 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
ATG4B-216ENST00000475195 TMEM243Q9BU79 118 aa10.9□□□□□ -0.66
ATG4B-216ENST00000475195 ANGP03950 147 aaKnown RBP10.89□□□□□ -0.67
ATG4B-216ENST00000475195 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
ATG4B-216ENST00000475195 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
ATG4B-216ENST00000475195 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
ATG4B-216ENST00000475195 WFDC2Q14508 124 aa10.88□□□□□ -0.67
ATG4B-216ENST00000475195 MIAQ16674 131 aa10.88□□□□□ -0.67
ATG4B-216ENST00000475195 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
ATG4B-216ENST00000475195 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
ATG4B-216ENST00000475195 HSPG2P98160 4391 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 H7C423 109 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 I3L3M4 83 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 AMTP48728 403 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 UQCC3Q6UW78 93 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
ATG4B-216ENST00000475195 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 A0A1B0GXF2 115 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 RPS10P46783 165 aaKnown RBP10.86□□□□□ -0.67
ATG4B-216ENST00000475195 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 LINC00269Q8N2A0 174 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 ANAPC16Q96DE5 110 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
ATG4B-216ENST00000475195 IGLV4-60A0A075B6I1 120 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 PPP1R17O96001 155 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 CRPP02741 224 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 PMCHP20382 165 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 NRACQ8N912 160 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
ATG4B-216ENST00000475195 TRBV24-1A0A075B6N3 115 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 TMEM218A2RU14 115 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 ESDP10768 282 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 GCSHP23434 173 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 CAMPP49913 170 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
ATG4B-216ENST00000475195 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
ATG4B-216ENST00000475195 IGLV5-52A0A0A0MRZ9 124 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 UBE2L6O14933 153 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 TSHBP01222 138 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 S100A8P05109 93 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 HBBP68871 147 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 REG3AQ06141 175 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 ATP5L2Q7Z4Y8 100 aa10.83□□□□□ -0.68
ATG4B-216ENST00000475195 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 TRAV8-4A0A0B4J246 113 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 SMKR1H3BMG3 65 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 VCYO14598 125 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 LECT2O14960 151 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 APCSP02743 223 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 MRPL54Q6P161 138 aaKnown RBP10.82□□□□□ -0.68
ATG4B-216ENST00000475195 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
ATG4B-216ENST00000475195 F8W036 122 aa10.81□□□□□ -0.68
ATG4B-216ENST00000475195 XGP55808 180 aa10.81□□□□□ -0.68
ATG4B-216ENST00000475195 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
ATG4B-216ENST00000475195 RPL32P62910 135 aaKnown RBP10.8□□□□□ -0.68
ATG4B-216ENST00000475195 C20orf78Q9BR46 151 aa10.8□□□□□ -0.68
ATG4B-216ENST00000475195 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
ATG4B-216ENST00000475195 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-216ENST00000475195 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-216ENST00000475195 FGF6P10767 208 aa10.79□□□□□ -0.68
ATG4B-216ENST00000475195 ZNF25P17030 456 aaPredicted RBP10.79□□□□□ -0.68
ATG4B-216ENST00000475195 CKS2P33552 79 aa10.79□□□□□ -0.68
ATG4B-216ENST00000475195 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
ATG4B-216ENST00000475195 PHOX2AO14813 284 aa10.78□□□□□ -0.68
ATG4B-216ENST00000475195 PPBPP02775 128 aa10.78□□□□□ -0.68
ATG4B-216ENST00000475195 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
ATG4B-216ENST00000475195 IMMP2LQ96T52 175 aa10.78□□□□□ -0.68
ATG4B-216ENST00000475195 TMEM242Q9NWH2 141 aa10.78□□□□□ -0.68
ATG4B-216ENST00000475195 TNFRSF6BO95407 300 aa10.77□□□□□ -0.69
ATG4B-216ENST00000475195 C14orf177Q52M58 125 aa10.77□□□□□ -0.69
ATG4B-216ENST00000475195 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.69
ATG4B-216ENST00000475195 AMMECR1LQ6DCA0 310 aa10.77□□□□□ -0.69
ATG4B-216ENST00000475195 Q8N1X5 172 aa10.76□□□□□ -0.69
ATG4B-216ENST00000475195 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
ATG4B-216ENST00000475195 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
ATG4B-216ENST00000475195 IGLV10-54A0A075B6I4 117 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.75□□□□□ -0.69
ATG4B-216ENST00000475195 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 D6R8Y8 96 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 USP17L23D6RBM5 183 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 RNASEKQ6P5S7 137 aaKnown RBP10.75□□□□□ -0.69
ATG4B-216ENST00000475195 COMMD7Q86VX2 200 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 BTF3L4Q96K17 158 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
ATG4B-216ENST00000475195 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
ATG4B-216ENST00000475195 C7orf77A4D0Y5 90 aa10.74□□□□□ -0.69
ATG4B-216ENST00000475195 HLA-DQA1P01909 254 aa10.74□□□□□ -0.69
ATG4B-216ENST00000475195 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
ATG4B-216ENST00000475195 Q6ZSA8 131 aa10.74□□□□□ -0.69
ATG4B-216ENST00000475195 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms