RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SPART-AS1P0CW21 52 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 ORMDL2Q53FV1 153 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 DEFB121Q5J5C9 76 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 PYY3Q5JQD4 70 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 FAM222AQ5U5X8 452 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 LINC00518Q8N0U6 118 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 SLC25A29Q8N8R3 303 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 Q8N976 141 aa4.66□□□□□ -1.66
ATG4A-207ENST00000474825 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 TRBV7-3A0A075B6L6 115 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 I3L3M4 83 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 LEPROTL1O95214 131 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 TSHBP01222 138 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 PRB2P02812 416 aaPredicted RBP4.65□□□□□ -1.67
ATG4A-207ENST00000474825 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 P0DMU3 169 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 FAM231AP0DMU4 169 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 FAM231CP0DMU5 169 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 G0S2P27469 103 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 CRYBA4P53673 196 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 UBE2D3P61077 147 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 UBE2D2P62837 147 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 RHOHQ15669 191 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 TOMM6Q96B49 74 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 KIR2DL4Q99706 377 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 SPATA25Q9BR10 227 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 PRO0255Q9UI72 69 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 HSPB8Q9UJY1 196 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 CELA1Q9UNI1 258 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 DNAH1Q9P2D7 4330 aa4.65□□□□□ -1.67
ATG4A-207ENST00000474825 IGIPA6NJ69 53 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 NPSP0C0P6 89 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 C3orf79P0CE67 100 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 DEFB130BP0DP73 79 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 DEFB130AP0DP74 79 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 AKR1D1P51857 326 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 EMP1P54849 157 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
ATG4A-207ENST00000474825 PMCHL1Q16048 86 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 DAZ4Q86SG3 579 aaKnown RBP4.64□□□□□ -1.67
ATG4A-207ENST00000474825 C20orf203Q8NBC4 194 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 RPL36ALQ969Q0 106 aaKnown RBP4.64□□□□□ -1.67
ATG4A-207ENST00000474825 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 DAZ3Q9NR90 486 aaKnown RBP4.64□□□□□ -1.67
ATG4A-207ENST00000474825 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 TNFRSF18Q9Y5U5 241 aa4.64□□□□□ -1.67
ATG4A-207ENST00000474825 TRGV4A0A0C4DH28 118 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 H3BNG1 76 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 SYS1-DBNDD2H3BUS1 97 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 DEFB4AO15263 64 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 ATP5LO75964 103 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 ATP5G1P05496 136 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
ATG4A-207ENST00000474825 DAD1P61803 113 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 C12orf74Q32Q52 190 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 PET117Q6UWS5 81 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 NEGR1Q7Z3B1 354 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 ERASQ7Z444 233 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 ZNRF2Q8NHG8 242 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 VSIG2Q96IQ7 327 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 B9D2Q9BPU9 175 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 PRADC1Q9BSG0 188 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 CHCHD7Q9BUK0 85 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 RETNQ9HD89 108 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 PYGO1Q9Y3Y4 419 aa4.63□□□□□ -1.67
ATG4A-207ENST00000474825 PLECQ15149 4684 aaKnown RBP4.63□□□□□ -1.67
ATG4A-207ENST00000474825 TGP01266 2768 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 VPS13DQ5THJ4 4388 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 TRAV26-1A0A087WT03 109 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 TRAV12-1A0A0B4J245 112 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 NUDT3O95989 172 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 LINC01545Q5VT33 79 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 LGALS9CQ6DKI2 356 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 NTM-AS1Q6ZSK4 140 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 FAM104AQ969W3 186 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 TIMM17AQ99595 171 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 MAP1LC3CQ9BXW4 147 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 CYSLTR1Q9Y271 337 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 TENM3Q9P273 2699 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
ATG4A-207ENST00000474825 A0A0J9YWU9 116 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 LOC100131303A0A0U1RQF7 123 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 GAGE12JA6NER3 117 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 KRTDAPP60985 99 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 GAGE1Q13065 139 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 GAGE4Q13068 117 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 GAGE5Q13069 117 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 COTL1Q14019 142 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 GAGE13Q4V321 117 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 TMEM97Q5BJF2 176 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 TEX43Q6ZNM6 134 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 MRPL52Q86TS9 123 aaKnown RBP4.61□□□□□ -1.67
ATG4A-207ENST00000474825 TMEM141Q96I45 108 aa4.61□□□□□ -1.67
ATG4A-207ENST00000474825 CSDC2Q9Y534 153 aaKnown RBP4.61□□□□□ -1.67
ATG4A-207ENST00000474825 H7C423 109 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms