RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
LIMD1-204ENST00000474665 DAZ3Q9NR90 486 aaKnown RBP4.72□□□□□ -1.65
LIMD1-204ENST00000474665 TRBV27A0A0K0K1C4 114 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 TNFRSF6BO95407 300 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 TSHBP01222 138 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 S100A8P05109 93 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 IQCJQ1A5X6 159 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 LINC01556Q5JQF7 62 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 KCNIP4Q6PIL6 250 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 NIT1Q86X76 327 aa4.71□□□□□ -1.66
LIMD1-204ENST00000474665 DNAH5Q8TE73 4624 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
LIMD1-204ENST00000474665 CKS2P33552 79 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
LIMD1-204ENST00000474665 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
LIMD1-204ENST00000474665 KIAA1644Q3SXP7 199 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 Q6ZRN7 208 aaPredicted RBP4.7□□□□□ -1.66
LIMD1-204ENST00000474665 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 GNB1LQ9BYB4 327 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 ST20Q9HBF5 79 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
LIMD1-204ENST00000474665 TRAV8-6A0A0B4J262 113 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 PRSS47A8MTI9 375 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 I3L3M4 83 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 SCO1O75880 301 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 PPBPP02775 128 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 ESDP10768 282 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 S100PP25815 95 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 MPV17L2Q567V2 206 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 ORMDL3Q8N138 153 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 Q8N976 141 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 PRELID3AQ96N28 172 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 C20orf78Q9BR46 151 aa4.69□□□□□ -1.66
LIMD1-204ENST00000474665 TRBV25-1A0A075B6N4 114 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 IGHV1-24A0A0C4DH33 117 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 COLCA2A8K830 154 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 C16orf90A8MZG2 172 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 IBA57-AS1B1ANH7 110 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 VCYO14598 125 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 PHOX2AO14813 284 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 APCSP02743 223 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 RBX1P62877 108 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 GAGE6Q13070 117 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 COTL1Q14019 142 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 FAM104AQ969W3 186 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 TMEM243Q9BU79 118 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 SMIM2Q9BVW6 85 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 SMCO4Q9NRQ5 59 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
LIMD1-204ENST00000474665 LRP1BQ9NZR2 4599 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 IGLV4-60A0A075B6I1 120 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
LIMD1-204ENST00000474665 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
LIMD1-204ENST00000474665 EPM2AB3EWF7 344 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 PPP1R17O96001 155 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 PMCHP20382 165 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 AMTP48728 403 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 TMEM97Q5BJF2 176 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 C20orf203Q8NBC4 194 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 ALKBH7Q9BT30 221 aaPredicted RBP4.67□□□□□ -1.66
LIMD1-204ENST00000474665 MRPL18Q9H0U6 180 aaKnown RBP4.67□□□□□ -1.66
LIMD1-204ENST00000474665 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
LIMD1-204ENST00000474665 LOC389332A0A1B0GUA5 103 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 TMEM262E9PQX1 116 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 K7EP13 123 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 TCAPO15273 167 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 ATP6V1G1O75348 118 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 MT-ND6P03923 174 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 FABP9Q0Z7S8 132 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 COX19Q49B96 90 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 TTC32Q5I0X7 151 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 ENHOQ6UWT2 76 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 URB1-AS1Q96HZ7 61 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 LAMTOR2Q9Y2Q5 125 aa4.66□□□□□ -1.66
LIMD1-204ENST00000474665 A0A087WX48 190 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 LINC01546A6NGU7 62 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 J3QL48 77 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 FGF6P10767 208 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 IFI27P40305 119 aaPredicted RBP4.65□□□□□ -1.67
LIMD1-204ENST00000474665 RPL39P62891 51 aaKnown RBP4.65□□□□□ -1.67
LIMD1-204ENST00000474665 TNP2Q05952 138 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 LAGE3Q14657 143 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 KRTAP26-1Q6PEX3 210 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 Q8N8P6 123 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.65□□□□□ -1.67
LIMD1-204ENST00000474665 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.67
LIMD1-204ENST00000474665 TRAV9-2A0A087WT02 112 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms