RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, human

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDPF1-205	ENST00000474256	IGLV4-60	A0A075B6I1	120 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	KRTAP10-4	P60372	401 aa	Predicted RBP	10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	BLOC1S1	P78537	153 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	ALKAL2	Q6UX46	152 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	GATD1	Q8NB37	220 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	DEFB104A	Q8WTQ1	72 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	GFRA4	Q9GZZ7	299 aa		10.21	□□□□□ -0.77
CDPF1-205	ENST00000474256	IGLV10-54	A0A075B6I4	117 aa		10.2	□□□□□ -0.78
CDPF1-205	ENST00000474256	TRAV8-4	A0A0B4J246	113 aa		10.2	□□□□□ -0.78
CDPF1-205	ENST00000474256	C9orf163	Q8N9P6	203 aa		10.2	□□□□□ -0.78
CDPF1-205	ENST00000474256	TRAV26-2	A0A0B4J265	109 aa		10.19	□□□□□ -0.78
CDPF1-205	ENST00000474256	COTL1	Q14019	142 aa		10.19	□□□□□ -0.78
CDPF1-205	ENST00000474256	FAM231D	Q6ZW35	169 aa		10.19	□□□□□ -0.78
CDPF1-205	ENST00000474256	CLRN3	Q8NCR9	226 aa		10.19	□□□□□ -0.78
CDPF1-205	ENST00000474256	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.18	□□□□□ -0.78
CDPF1-205	ENST00000474256	AMT	P48728	403 aa		10.18	□□□□□ -0.78
CDPF1-205	ENST00000474256	hCG_2014768	A0A024R1R8	64 aa		10.17	□□□□□ -0.78
CDPF1-205	ENST00000474256		J3QL48	77 aa		10.17	□□□□□ -0.78
CDPF1-205	ENST00000474256	UBE2L6	O14933	153 aa		10.17	□□□□□ -0.78
CDPF1-205	ENST00000474256	GATC	O43716	136 aa	Known RBP	10.17	□□□□□ -0.78
CDPF1-205	ENST00000474256	FOXA3	P55318	350 aa	Predicted RBP	10.17	□□□□□ -0.78
CDPF1-205	ENST00000474256		A8MWL6	223 aa		10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	CNBP	P62633	177 aa	Known RBP	10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	CT83	Q5H943	113 aa		10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	SDIM1	Q6ZPB5	146 aa		10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	SMIM15	Q7Z3B0	74 aa		10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	RPL39L	Q96EH5	51 aa	Known RBP	10.16	□□□□□ -0.78
CDPF1-205	ENST00000474256	TEX261	Q6UWH6	196 aa		10.15	□□□□□ -0.78
CDPF1-205	ENST00000474256	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.15	□□□□□ -0.78
CDPF1-205	ENST00000474256	hDV102S1	A0JD36	115 aa		10.14	□□□□□ -0.79
CDPF1-205	ENST00000474256	NDUFS6	O75380	124 aa	Known RBP	10.14	□□□□□ -0.79
CDPF1-205	ENST00000474256	NCR2	O95944	276 aa		10.14	□□□□□ -0.79
CDPF1-205	ENST00000474256	SDHAF1	A6NFY7	115 aa		10.13	□□□□□ -0.79
CDPF1-205	ENST00000474256	PANO1	I0J062	215 aa		10.13	□□□□□ -0.79
CDPF1-205	ENST00000474256	CEBPG	P53567	150 aa		10.13	□□□□□ -0.79
CDPF1-205	ENST00000474256	LRP1	Q07954	4544 aa	Known RBP	10.13	□□□□□ -0.79
CDPF1-205	ENST00000474256	TRBV6-5	A0A0K0K1A5	114 aa		10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256		H7C423	109 aa		10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256	SLPI	P03973	132 aa		10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256	CIRBP	Q14011	172 aa	Known RBP	10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256	LINC01551	Q86U37	167 aa		10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256	EIF5A2	Q9GZV4	153 aa	Known RBP	10.12	□□□□□ -0.79
CDPF1-205	ENST00000474256	TSKU	Q8WUA8	353 aa		10.11	□□□□□ -0.79
CDPF1-205	ENST00000474256	FAM210A	Q96ND0	272 aa		10.11	□□□□□ -0.79
CDPF1-205	ENST00000474256	SMIM7	Q9BQ49	75 aa		10.11	□□□□□ -0.79
CDPF1-205	ENST00000474256	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	FAM231B	A6NCW3	169 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	GAGE12H	A6NDE8	117 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	GAS8-AS1	O95177	125 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	APCS	P02743	223 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	AMMECR1L	Q6DCA0	310 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	AP5S1	Q9NUS5	200 aa		10.1	□□□□□ -0.79
CDPF1-205	ENST00000474256	FAT3	Q8TDW7	4589 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	IGKV3OR2-268	A0A0C4DH90	116 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256		A0A1B0GUT8	65 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	HIGD1C	A8MV81	97 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256		I3L3M4	83 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	SRP19	P09132	144 aa	Known RBP	10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	FGF6	P10767	208 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	RPL37A	P61513	92 aa	Known RBP	10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	C15orf56	Q8N910	161 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	BORCS7	Q96B45	105 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	TMEM191A	Q9H0A3	160 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	OSTC	Q9NRP0	149 aa		10.09	□□□□□ -0.79
CDPF1-205	ENST00000474256	IGHV3-64	A0A075B6Q5	118 aa		10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	ZNF727	A8MUV8	499 aa		10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	PMCH	P20382	165 aa		10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	RNASEK	Q6P5S7	137 aa	Known RBP	10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	CFAP161	Q6P656	301 aa		10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	RNF185	Q96GF1	192 aa		10.08	□□□□□ -0.8
CDPF1-205	ENST00000474256	OXT	P01178	125 aa		10.07	□□□□□ -0.8
CDPF1-205	ENST00000474256	ESD	P10768	282 aa		10.07	□□□□□ -0.8
CDPF1-205	ENST00000474256	ZNF25	P17030	456 aa	Predicted RBP	10.07	□□□□□ -0.8
CDPF1-205	ENST00000474256	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.07	□□□□□ -0.8
CDPF1-205	ENST00000474256	TSHB	P01222	138 aa		10.06	□□□□□ -0.8
CDPF1-205	ENST00000474256	RAB4A	P20338	218 aa		10.06	□□□□□ -0.8
CDPF1-205	ENST00000474256	POLR2K	P53803	58 aa	Known RBP	10.06	□□□□□ -0.8
CDPF1-205	ENST00000474256	ST20	Q9HBF5	79 aa		10.06	□□□□□ -0.8
CDPF1-205	ENST00000474256		V9GYV3	84 aa		10.06	□□□□□ -0.8
CDPF1-205	ENST00000474256	PKHD1L1	Q86WI1	4243 aa		10.05	□□□□□ -0.8
CDPF1-205	ENST00000474256	RPS10	P46783	165 aa	Known RBP	10.05	□□□□□ -0.8
CDPF1-205	ENST00000474256	HNRNPA3	P51991	378 aa	Known RBP	10.05	□□□□□ -0.8
CDPF1-205	ENST00000474256	OR5A1	Q8NGJ0	315 aa		10.05	□□□□□ -0.8
CDPF1-205	ENST00000474256	MRAP2	Q96G30	205 aa		10.05	□□□□□ -0.8
CDPF1-205	ENST00000474256	TRBV27	A0A0K0K1C4	114 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	CHTF8	P0CG12	524 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	FOXI1	Q12951	378 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	AMN1	Q8IY45	258 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	SPACA4	Q8TDM5	124 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	BTF3L4	Q96K17	158 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256	TMEM242	Q9NWH2	141 aa		10.04	□□□□□ -0.8
CDPF1-205	ENST00000474256		A0A087WYN8	130 aa		10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256		A0A1B0GVG6	124 aa		10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256	TMEM241	Q24JQ0	296 aa		10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256	HIGD2B	Q4VC39	106 aa		10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256	NUP35	Q8NFH5	326 aa		10.03	□□□□□ -0.8
CDPF1-205	ENST00000474256	ISOC2	Q96AB3	205 aa		10.03	□□□□□ -0.8

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