RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 TRBV10-1A0A0K0K1A3 114 aa13.62□□□□□ -0.23
APP-215ENST00000474136 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
APP-215ENST00000474136 PAX4O43316 350 aa13.62□□□□□ -0.23
APP-215ENST00000474136 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
APP-215ENST00000474136 FHL2Q14192 279 aa13.62□□□□□ -0.23
APP-215ENST00000474136 SUMO4Q6EEV6 95 aa13.62□□□□□ -0.23
APP-215ENST00000474136 PRO0255Q9UI72 69 aa13.62□□□□□ -0.23
APP-215ENST00000474136 HHLA3Q9XRX5 114 aa13.62□□□□□ -0.23
APP-215ENST00000474136 D6R8Y8 96 aa13.61□□□□□ -0.23
APP-215ENST00000474136 M0QY20 66 aa13.61□□□□□ -0.23
APP-215ENST00000474136 LYPD5Q6UWN5 251 aa13.61□□□□□ -0.23
APP-215ENST00000474136 DNAJC30Q96LL9 226 aa13.61□□□□□ -0.23
APP-215ENST00000474136 PRELID3AQ96N28 172 aa13.61□□□□□ -0.23
APP-215ENST00000474136 PRADC1Q9BSG0 188 aa13.61□□□□□ -0.23
APP-215ENST00000474136 RHOHQ15669 191 aa13.6□□□□□ -0.23
APP-215ENST00000474136 KIAA1644Q3SXP7 199 aa13.6□□□□□ -0.23
APP-215ENST00000474136 NIT2Q9NQR4 276 aa13.6□□□□□ -0.23
APP-215ENST00000474136 K7EQD1 137 aa13.59□□□□□ -0.23
APP-215ENST00000474136 ALKBH7Q9BT30 221 aaPredicted RBP13.59□□□□□ -0.23
APP-215ENST00000474136 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
APP-215ENST00000474136 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
APP-215ENST00000474136 TRAV26-2A0A0B4J265 109 aa13.58□□□□□ -0.24
APP-215ENST00000474136 WFDC10BQ8IUB3 73 aa13.58□□□□□ -0.24
APP-215ENST00000474136 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.24
APP-215ENST00000474136 C20orf78Q9BR46 151 aa13.58□□□□□ -0.24
APP-215ENST00000474136 FAM30AQ9NZY2 134 aa13.58□□□□□ -0.24
APP-215ENST00000474136 TRAV9-2A0A087WT02 112 aa13.57□□□□□ -0.24
APP-215ENST00000474136 TRBV6-5A0A0K0K1A5 114 aa13.57□□□□□ -0.24
APP-215ENST00000474136 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
APP-215ENST00000474136 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
APP-215ENST00000474136 SRIP30626 198 aa13.57□□□□□ -0.24
APP-215ENST00000474136 OR10J3Q5JRS4 329 aa13.57□□□□□ -0.24
APP-215ENST00000474136 CRYBA4P53673 196 aa13.56□□□□□ -0.24
APP-215ENST00000474136 RAB5BP61020 215 aa13.56□□□□□ -0.24
APP-215ENST00000474136 RPL36AP83881 106 aaKnown RBP13.56□□□□□ -0.24
APP-215ENST00000474136 RPL36ALQ969Q0 106 aaKnown RBP13.56□□□□□ -0.24
APP-215ENST00000474136 ST20Q9HBF5 79 aa13.56□□□□□ -0.24
APP-215ENST00000474136 PRSS47A8MTI9 375 aa13.55□□□□□ -0.24
APP-215ENST00000474136 SMKR1H3BMG3 65 aa13.55□□□□□ -0.24
APP-215ENST00000474136 NCR2O95944 276 aa13.55□□□□□ -0.24
APP-215ENST00000474136 NRACQ8N912 160 aa13.55□□□□□ -0.24
APP-215ENST00000474136 MAP1LC3AQ9H492 121 aa13.55□□□□□ -0.24
APP-215ENST00000474136 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
APP-215ENST00000474136 SUMO2P61956 95 aaKnown RBP13.54□□□□□ -0.24
APP-215ENST00000474136 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
APP-215ENST00000474136 MRPL23Q16540 153 aaKnown RBP13.54□□□□□ -0.24
APP-215ENST00000474136 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
APP-215ENST00000474136 NPYP01303 97 aa13.53□□□□□ -0.24
APP-215ENST00000474136 NEGR1Q7Z3B1 354 aa13.53□□□□□ -0.24
APP-215ENST00000474136 SH2D6Q7Z4S9 175 aa13.53□□□□□ -0.24
APP-215ENST00000474136 LRCOL1A6NCL2 159 aa13.52□□□□□ -0.25
APP-215ENST00000474136 VCYO14598 125 aa13.52□□□□□ -0.25
APP-215ENST00000474136 TCAPO15273 167 aa13.52□□□□□ -0.25
APP-215ENST00000474136 PMCHP20382 165 aa13.52□□□□□ -0.25
APP-215ENST00000474136 Q0VG73 95 aa13.52□□□□□ -0.25
APP-215ENST00000474136 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
APP-215ENST00000474136 RPL39LQ96EH5 51 aaKnown RBP13.52□□□□□ -0.25
APP-215ENST00000474136 NXT2Q9NPJ8 142 aaKnown RBP13.52□□□□□ -0.25
APP-215ENST00000474136 K7EMI3 77 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BKO60814 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BJP06899 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BOP23527 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BBP33778 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
APP-215ENST00000474136 C18orf32Q8TCD1 76 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
APP-215ENST00000474136 SDHAF1A6NFY7 115 aa13.5□□□□□ -0.25
APP-215ENST00000474136 GAS8-AS1O95177 125 aa13.5□□□□□ -0.25
APP-215ENST00000474136 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
APP-215ENST00000474136 PRSS3P2Q8NHM4 247 aa13.5□□□□□ -0.25
APP-215ENST00000474136 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
APP-215ENST00000474136 TRBV27A0A0K0K1C4 114 aa13.49□□□□□ -0.25
APP-215ENST00000474136 GYPEP15421 78 aa13.49□□□□□ -0.25
APP-215ENST00000474136 POLR2KP53803 58 aaKnown RBP13.49□□□□□ -0.25
APP-215ENST00000474136 SERTAD4-AS1Q5TG53 156 aa13.49□□□□□ -0.25
APP-215ENST00000474136 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
APP-215ENST00000474136 KIR2DL4Q99706 377 aa13.49□□□□□ -0.25
APP-215ENST00000474136 K7EP13 123 aa13.48□□□□□ -0.25
APP-215ENST00000474136 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
APP-215ENST00000474136 BAGE3Q86Y29 109 aa13.48□□□□□ -0.25
APP-215ENST00000474136 SMIM2Q9BVW6 85 aa13.48□□□□□ -0.25
APP-215ENST00000474136 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
APP-215ENST00000474136 I3L3M4 83 aa13.47□□□□□ -0.25
APP-215ENST00000474136 PSCAO43653 123 aa13.47□□□□□ -0.25
APP-215ENST00000474136 GAGE1Q13065 139 aa13.47□□□□□ -0.25
APP-215ENST00000474136 GAGE4Q13068 117 aa13.47□□□□□ -0.25
APP-215ENST00000474136 GAGE5Q13069 117 aa13.47□□□□□ -0.25
APP-215ENST00000474136 GAGE13Q4V321 117 aa13.47□□□□□ -0.25
APP-215ENST00000474136 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
APP-215ENST00000474136 LINC00528Q8N1L1 170 aa13.47□□□□□ -0.25
APP-215ENST00000474136 Q8N8P6 123 aa13.47□□□□□ -0.25
APP-215ENST00000474136 FAT3Q8TDW7 4589 aa13.46□□□□□ -0.25
APP-215ENST00000474136 LOC389332A0A1B0GUA5 103 aa13.46□□□□□ -0.25
APP-215ENST00000474136 UBE2D3P61077 147 aa13.46□□□□□ -0.25
APP-215ENST00000474136 UBE2D2P62837 147 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms