RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
SHROOM3-204ENST00000473602 CRPP02741 224 aa8.59□□□□□ -1.03
SHROOM3-204ENST00000473602 TMEM241Q24JQ0 296 aa8.59□□□□□ -1.03
SHROOM3-204ENST00000473602 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
SHROOM3-204ENST00000473602 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
SHROOM3-204ENST00000473602 IGKV2D-24A0A075B6R9 120 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 IGLV5-52A0A0A0MRZ9 124 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 A0A1B0GUT8 65 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 HIGD1CA8MV81 97 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 GCSHP23434 173 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 ISOC2Q96AB3 205 aa8.58□□□□□ -1.04
SHROOM3-204ENST00000473602 DNAH8Q96JB1 4490 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 V9GYV3 84 aa8.57□□□□□ -1.04
SHROOM3-204ENST00000473602 C9JQL5 133 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 RPL23P62829 140 aaKnown RBP8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 RBX1P62877 108 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 HAMPP81172 84 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 GAGE6Q13070 117 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 COTL1Q14019 142 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 MIAQ16674 131 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 Q8N976 141 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
SHROOM3-204ENST00000473602 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 WFDC2Q14508 124 aa8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 ADIRFQ15847 76 aa8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
SHROOM3-204ENST00000473602 HMCN2Q8NDA2 5059 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 NCR2O95944 276 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 AMTP48728 403 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 RIGQ13278 110 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
SHROOM3-204ENST00000473602 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 UBE2L6O14933 153 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 LECT2O14960 151 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
SHROOM3-204ENST00000473602 SMIM27A0A1W2PRY6 76 aa8.52□□□□□ -1.05
SHROOM3-204ENST00000473602 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
SHROOM3-204ENST00000473602 REG3AQ06141 175 aa8.52□□□□□ -1.05
SHROOM3-204ENST00000473602 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
SHROOM3-204ENST00000473602 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
SHROOM3-204ENST00000473602 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
SHROOM3-204ENST00000473602 H7C423 109 aa8.51□□□□□ -1.05
SHROOM3-204ENST00000473602 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
SHROOM3-204ENST00000473602 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 A0A1B0GW15 77 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 I3L3M4 83 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 PPP1R17O96001 155 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 APCSP02743 223 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 RAB4AP20338 218 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
SHROOM3-204ENST00000473602 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
SHROOM3-204ENST00000473602 HLA-DQA1P01909 254 aa8.49□□□□□ -1.05
SHROOM3-204ENST00000473602 PMCHP20382 165 aa8.49□□□□□ -1.05
SHROOM3-204ENST00000473602 SVBPQ8N300 66 aa8.49□□□□□ -1.05
SHROOM3-204ENST00000473602 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
SHROOM3-204ENST00000473602 PNRC1Q12796 327 aaPredicted RBP8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
SHROOM3-204ENST00000473602 TRBV27A0A0K0K1C4 114 aa8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 USP17L23D6RBM5 183 aa8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 GAS8-AS1O95177 125 aa8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 S100A8P05109 93 aa8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 ZNF25P17030 456 aaPredicted RBP8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
SHROOM3-204ENST00000473602 PPP1R2P9O14990 202 aa8.46□□□□□ -1.06
SHROOM3-204ENST00000473602 FAM104BQ5XKR9 115 aa8.46□□□□□ -1.06
SHROOM3-204ENST00000473602 Q6ZSA8 131 aa8.46□□□□□ -1.06
SHROOM3-204ENST00000473602 FAM30AQ9NZY2 134 aa8.46□□□□□ -1.06
SHROOM3-204ENST00000473602 IGLV10-54A0A075B6I4 117 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 F8W036 122 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 SNAPINO95295 136 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 TSHBP01222 138 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 FGF6P10767 208 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 ESDP10768 282 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 HBBP68871 147 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 SERTAD4-AS1Q5TG53 156 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 CLRN3Q8NCR9 226 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms