RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 IGKCP01834 107 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 GAGE1Q13065 139 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 GAGE4Q13068 117 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 GAGE5Q13069 117 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 DAZ2Q13117 558 aaKnown RBP4.44□□□□□ -1.7
CLK1-210ENST00000473565 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 C12orf54Q6X4T0 127 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 ERASQ7Z444 233 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 PTH2Q96A98 100 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 HHLA3Q9XRX5 114 aa4.44□□□□□ -1.7
CLK1-210ENST00000473565 IGHV4-30-4P0DP06 118 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 PIK3CD-AS1Q5SR53 167 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 CHTOPQ9Y3Y2 248 aaKnown RBP4.43□□□□□ -1.7
CLK1-210ENST00000473565 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 K7EMI3 77 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 DPM2O94777 84 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 C20orf203Q8NBC4 194 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 ZMAT4Q9H898 229 aa4.43□□□□□ -1.7
CLK1-210ENST00000473565 OR11H2Q8NH07 326 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 F8VRH5 84 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 G3V4G9 280 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 K7EQD1 137 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 PRB2P02812 416 aaPredicted RBP4.42□□□□□ -1.7
CLK1-210ENST00000473565 HINT1P49773 126 aaPredicted RBP4.42□□□□□ -1.7
CLK1-210ENST00000473565 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 OVOL2Q9BRP0 275 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 EDA2RQ9HAV5 297 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 RETNQ9HD89 108 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 TRGV4A0A0C4DH28 118 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 RHOHQ15669 191 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 FAM222AQ5U5X8 452 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 CHCHD7Q9BUK0 85 aa4.42□□□□□ -1.7
CLK1-210ENST00000473565 M0R143 59 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 COX8AP10176 69 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 FGF6P10767 208 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 FAM104AQ969W3 186 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 CST9LQ9H4G1 147 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 IGLV4-69A0A075B6H9 119 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 A0A1B0GV90 55 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 C11orf86A6NJI1 115 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 WIPF1O43516 503 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 FHL2Q14192 279 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 SHISA2Q6UWI4 295 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 CELA1Q9UNI1 258 aa4.41□□□□□ -1.7
CLK1-210ENST00000473565 TRAV8-6A0A0B4J262 113 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 LINC00694P0DN24 101 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 APOC4P55056 127 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 COTL1Q14019 142 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 PMVKQ15126 192 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 NTM-AS1Q6ZSK4 140 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 C2orf91Q6ZV80 131 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 TIMM17AQ99595 171 aa4.4□□□□□ -1.7
CLK1-210ENST00000473565 A0A096LPF7 62 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
CLK1-210ENST00000473565 MPV17L2Q567V2 206 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
CLK1-210ENST00000473565 PLNP26678 52 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 UBE2D3P61077 147 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 UBE2D2P62837 147 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 Q6ZUT4 128 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 Q6ZVH6 145 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 TMEM141Q96I45 108 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 DNAJC30Q96LL9 226 aa4.4□□□□□ -1.71
CLK1-210ENST00000473565 IGHV3-64A0A075B6Q5 118 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 KIR2DL5BQ8NHK3 375 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 A0A0J9YY99 117 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 HTN3P15516 51 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 G0S2P27469 103 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 TMEM170BQ5T4T1 132 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 Q8NAQ8 132 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 UBE2D4Q9Y2X8 147 aa4.39□□□□□ -1.71
CLK1-210ENST00000473565 MRPS16Q9Y3D3 137 aaKnown RBP4.39□□□□□ -1.71
CLK1-210ENST00000473565 CHAC1Q9BUX1 264 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 VCX2Q9H322 139 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 TRBV10-1A0A0K0K1A3 114 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 LINC00612Q8N6U2 182 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 C2orf88Q9BSF0 95 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 PRADC1Q9BSG0 188 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 TRBV6-4A0A1B0GX49 114 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 SMIM9A6NGZ8 99 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 GYPEP15421 78 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 RNF183Q96D59 192 aa4.38□□□□□ -1.71
CLK1-210ENST00000473565 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 MDFIQ99750 246 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 K7EP13 123 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 DAD1P61803 113 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 GAGE6Q13070 117 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 DGAT2L7PQ6IED9 249 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
CLK1-210ENST00000473565 TRBV25-1A0A075B6N4 114 aa4.36□□□□□ -1.71
CLK1-210ENST00000473565 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
CLK1-210ENST00000473565 ZNF25P17030 456 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms