RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TEX261Q6UWH6 196 aa14.78□□□□□ -0.04
PTP4A1-203ENST00000473334 DEFB104AQ8WTQ1 72 aa14.78□□□□□ -0.04
PTP4A1-203ENST00000473334 A0A1B0GUV1 79 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 HIGD1CA8MV81 97 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 HLA-DQA1P01909 254 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 AMTP48728 403 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 Q5VSD8 79 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 C20orf203Q8NBC4 194 aa14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 RPL39LQ96EH5 51 aaKnown RBP14.77□□□□□ -0.05
PTP4A1-203ENST00000473334 FAM231BA6NCW3 169 aa14.76□□□□□ -0.05
PTP4A1-203ENST00000473334 UBE2L6O14933 153 aa14.76□□□□□ -0.05
PTP4A1-203ENST00000473334 SMR3BP02814 79 aaPredicted RBP14.76□□□□□ -0.05
PTP4A1-203ENST00000473334 FAM74A3Q4VXF1 159 aa14.76□□□□□ -0.05
PTP4A1-203ENST00000473334 Q6ZSA8 131 aa14.76□□□□□ -0.05
PTP4A1-203ENST00000473334 A0A1B0GUT8 65 aa14.75□□□□□ -0.05
PTP4A1-203ENST00000473334 REG3AQ06141 175 aa14.75□□□□□ -0.05
PTP4A1-203ENST00000473334 TMEM241Q24JQ0 296 aa14.75□□□□□ -0.05
PTP4A1-203ENST00000473334 VPS13BQ7Z7G8 4022 aa14.75□□□□□ -0.05
PTP4A1-203ENST00000473334 IGLV4-60A0A075B6I1 120 aa14.74□□□□□ -0.05
PTP4A1-203ENST00000473334 ISOC2Q96AB3 205 aa14.74□□□□□ -0.05
PTP4A1-203ENST00000473334 V9GYV3 84 aa14.74□□□□□ -0.05
PTP4A1-203ENST00000473334 USP17L23D6RBM5 183 aa14.73□□□□□ -0.05
PTP4A1-203ENST00000473334 LINC01620Q4KN68 170 aa14.73□□□□□ -0.05
PTP4A1-203ENST00000473334 KRTAP26-1Q6PEX3 210 aa14.73□□□□□ -0.05
PTP4A1-203ENST00000473334 C9JQL5 133 aa14.72□□□□□ -0.05
PTP4A1-203ENST00000473334 NCR2O95944 276 aa14.72□□□□□ -0.05
PTP4A1-203ENST00000473334 RPL23P62829 140 aaKnown RBP14.72□□□□□ -0.05
PTP4A1-203ENST00000473334 PEA15Q15121 130 aa14.72□□□□□ -0.05
PTP4A1-203ENST00000473334 TMEM191AQ9H0A3 160 aa14.72□□□□□ -0.05
PTP4A1-203ENST00000473334 TRAV8-4A0A0B4J246 113 aa14.71□□□□□ -0.05
PTP4A1-203ENST00000473334 SDHAF1A6NFY7 115 aa14.71□□□□□ -0.05
PTP4A1-203ENST00000473334 FAM229AH3BQW9 127 aa14.71□□□□□ -0.05
PTP4A1-203ENST00000473334 NAT8Q9UHE5 227 aa14.71□□□□□ -0.05
PTP4A1-203ENST00000473334 IGLV10-54A0A075B6I4 117 aa14.7□□□□□ -0.06
PTP4A1-203ENST00000473334 TRBV6-5A0A0K0K1A5 114 aa14.7□□□□□ -0.06
PTP4A1-203ENST00000473334 SRSF3P84103 164 aaKnown RBP14.7□□□□□ -0.06
PTP4A1-203ENST00000473334 ADIRFQ15847 76 aa14.7□□□□□ -0.06
PTP4A1-203ENST00000473334 SMDT1Q9H4I9 107 aa14.7□□□□□ -0.06
PTP4A1-203ENST00000473334 APCSP02743 223 aa14.69□□□□□ -0.06
PTP4A1-203ENST00000473334 RIGQ13278 110 aa14.68□□□□□ -0.06
PTP4A1-203ENST00000473334 NUP35Q8NFH5 326 aa14.68□□□□□ -0.06
PTP4A1-203ENST00000473334 RNF185Q96GF1 192 aa14.68□□□□□ -0.06
PTP4A1-203ENST00000473334 PRSS1P07477 247 aa14.67□□□□□ -0.06
PTP4A1-203ENST00000473334 INAFM2P0DMQ5 153 aa14.67□□□□□ -0.06
PTP4A1-203ENST00000473334 PMCHP20382 165 aa14.67□□□□□ -0.06
PTP4A1-203ENST00000473334 H7C423 109 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 I3L3M4 83 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 GAS8-AS1O95177 125 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 RAB4AP20338 218 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 AMN1Q8IY45 258 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 MRAP2Q96G30 205 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 ST20Q9HBF5 79 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 NAT8BQ9UHF3 227 aa14.66□□□□□ -0.06
PTP4A1-203ENST00000473334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.65□□□□□ -0.06
PTP4A1-203ENST00000473334 IGKV2-29A2NJV5 120 aaPredicted RBP14.65□□□□□ -0.06
PTP4A1-203ENST00000473334 AMMECR1LQ6DCA0 310 aa14.65□□□□□ -0.06
PTP4A1-203ENST00000473334 DGAT2L7PQ6IED9 249 aa14.64□□□□□ -0.07
PTP4A1-203ENST00000473334 RNASEKQ6P5S7 137 aaKnown RBP14.63□□□□□ -0.07
PTP4A1-203ENST00000473334 SCXQ7RTU7 201 aa14.63□□□□□ -0.07
PTP4A1-203ENST00000473334 CLRN3Q8NCR9 226 aa14.63□□□□□ -0.07
PTP4A1-203ENST00000473334 SMIM27A0A1W2PRY6 76 aa14.62□□□□□ -0.07
PTP4A1-203ENST00000473334 FGF6P10767 208 aa14.62□□□□□ -0.07
PTP4A1-203ENST00000473334 RPS10P46783 165 aaKnown RBP14.62□□□□□ -0.07
PTP4A1-203ENST00000473334 SRRM2Q9UQ35 2752 aaKnown RBP14.62□□□□□ -0.07
PTP4A1-203ENST00000473334 TSHBP01222 138 aa14.61□□□□□ -0.07
PTP4A1-203ENST00000473334 POLR2KP53803 58 aaKnown RBP14.61□□□□□ -0.07
PTP4A1-203ENST00000473334 CHAC1Q9BUX1 264 aa14.61□□□□□ -0.07
PTP4A1-203ENST00000473334 TMEM242Q9NWH2 141 aa14.61□□□□□ -0.07
PTP4A1-203ENST00000473334 IGKV3OR2-268A0A0C4DH90 116 aa14.6□□□□□ -0.07
PTP4A1-203ENST00000473334 ESDP10768 282 aa14.6□□□□□ -0.07
PTP4A1-203ENST00000473334 ZNF25P17030 456 aaPredicted RBP14.6□□□□□ -0.07
PTP4A1-203ENST00000473334 TRBV27A0A0K0K1C4 114 aa14.59□□□□□ -0.07
PTP4A1-203ENST00000473334 SMKR1H3BMG3 65 aa14.59□□□□□ -0.07
PTP4A1-203ENST00000473334 LINC00528Q8N1L1 170 aa14.59□□□□□ -0.07
PTP4A1-203ENST00000473334 C9orf163Q8N9P6 203 aa14.59□□□□□ -0.07
PTP4A1-203ENST00000473334 hDV102S1A0JD36 115 aa14.58□□□□□ -0.08
PTP4A1-203ENST00000473334 PPP1R17O96001 155 aa14.58□□□□□ -0.08
PTP4A1-203ENST00000473334 BTF3L4Q96K17 158 aa14.58□□□□□ -0.08
PTP4A1-203ENST00000473334 A0A1B0GW15 77 aa14.57□□□□□ -0.08
PTP4A1-203ENST00000473334 GAGE12HA6NDE8 117 aa14.57□□□□□ -0.08
PTP4A1-203ENST00000473334 FAM104BQ5XKR9 115 aa14.57□□□□□ -0.08
PTP4A1-203ENST00000473334 TMEM101Q96IK0 257 aa14.57□□□□□ -0.08
PTP4A1-203ENST00000473334 PLA2G1BP04054 148 aaKnown RBP14.56□□□□□ -0.08
PTP4A1-203ENST00000473334 CAMPP49913 170 aa14.56□□□□□ -0.08
PTP4A1-203ENST00000473334 CNBPP62633 177 aaKnown RBP14.56□□□□□ -0.08
PTP4A1-203ENST00000473334 NRACQ8N912 160 aa14.56□□□□□ -0.08
PTP4A1-203ENST00000473334 CIRBP-AS1Q8TBR5 109 aa14.56□□□□□ -0.08
PTP4A1-203ENST00000473334 VCYO14598 125 aa14.55□□□□□ -0.08
PTP4A1-203ENST00000473334 SUMO2P61956 95 aaKnown RBP14.55□□□□□ -0.08
PTP4A1-203ENST00000473334 MRPL51Q4U2R6 128 aaKnown RBP14.55□□□□□ -0.08
PTP4A1-203ENST00000473334 OR5A1Q8NGJ0 315 aa14.55□□□□□ -0.08
PTP4A1-203ENST00000473334 AP5S1Q9NUS5 200 aa14.55□□□□□ -0.08
PTP4A1-203ENST00000473334 C7orf77A4D0Y5 90 aa14.54□□□□□ -0.08
PTP4A1-203ENST00000473334 MRPL52Q86TS9 123 aaKnown RBP14.54□□□□□ -0.08
PTP4A1-203ENST00000473334 CHCHD10Q8WYQ3 142 aaPredicted RBP14.54□□□□□ -0.08
PTP4A1-203ENST00000473334 PPP1R2P9O14990 202 aa14.53□□□□□ -0.08
PTP4A1-203ENST00000473334 FCER1GP30273 86 aa14.53□□□□□ -0.08
PTP4A1-203ENST00000473334 RAB14P61106 215 aa14.53□□□□□ -0.08
PTP4A1-203ENST00000473334 CFAP161Q6P656 301 aa14.53□□□□□ -0.08
PTP4A1-203ENST00000473334 LINC00862A6NCI5 91 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms