RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 COX6CP09669 75 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
APTX-216ENST00000472896 ZNF56Q15929 161 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 Q1RN00 199 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 C9orf47Q6ZRZ4 202 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 POM121L12Q8N7R1 296 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 CHCHD5Q9BSY4 110 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
APTX-216ENST00000472896 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 J3KT08 172 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 NDUFA7O95182 113 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 KRTAP10-3P60369 221 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 NPBQ8NG41 125 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 PRAC2D3DTV9 90 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 NBR2O15453 112 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 DLX1P56177 255 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 MUSTN1Q8IVN3 82 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 LINC00526Q96FQ7 95 aa7.56□□□□□ -1.2
APTX-216ENST00000472896 SMIM9A6NGZ8 99 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 F8WDY8 70 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 LY6LH3BQJ8 138 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
APTX-216ENST00000472896 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 IGFL4Q6B9Z1 124 aa7.55□□□□□ -1.2
APTX-216ENST00000472896 IGHV3OR16-10A0A075B7F0 116 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 H7C423 109 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 TSHBP01222 138 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
APTX-216ENST00000472896 IGHV4OR15-8A0A075B7B6 117 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 A0A087WW49 117 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 NPFFO15130 113 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 TRIAP1O43715 76 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 CTSGP08311 255 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 CXCL5P42830 114 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
APTX-216ENST00000472896 TRAV25A0A0B4J276 109 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 VCYO14598 125 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 BUB3O43684 328 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 EMP1P54849 157 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 C4orf48Q5BLP8 95 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 LINC00643Q86TS7 51 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
APTX-216ENST00000472896 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 H7C2G1 150 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 CCL17Q92583 94 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 METTL26Q96S19 204 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
APTX-216ENST00000472896 ZNF256Q9Y2P7 627 aaPredicted RBP7.52□□□□□ -1.21
APTX-216ENST00000472896 LST1O00453 97 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 PRB2P02812 416 aaPredicted RBP7.51□□□□□ -1.21
APTX-216ENST00000472896 MGPP08493 103 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
APTX-216ENST00000472896 HERVK_113P63121 156 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 TMEM219Q86XT9 240 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
APTX-216ENST00000472896 ZNRF2Q8NHG8 242 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 PHLDA3Q9Y5J5 127 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 S4R3C0 116 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 TRGV11A0A075B6L2 103 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 ELANEP08246 267 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 S100A4P26447 101 aaKnown RBP7.51□□□□□ -1.21
APTX-216ENST00000472896 RNF182Q8N6D2 247 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 LINC00477Q96M19 166 aa7.51□□□□□ -1.21
APTX-216ENST00000472896 NXPH4O95158 308 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 CRYGAP11844 174 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 COX7CP15954 63 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 KLK9Q2XQG4 91 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 C9orf139Q6ZV77 190 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 FAM110DQ8TAY7 271 aaPredicted RBP7.5□□□□□ -1.21
APTX-216ENST00000472896 KLK9Q9UKQ9 250 aa7.5□□□□□ -1.21
APTX-216ENST00000472896 CLPSL1A2RUU4 121 aa7.49□□□□□ -1.21
APTX-216ENST00000472896 RHOHQ15669 191 aa7.49□□□□□ -1.21
APTX-216ENST00000472896 DEFB112Q30KQ8 113 aa7.49□□□□□ -1.21
APTX-216ENST00000472896 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
APTX-216ENST00000472896 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 TRBV6-5A0A0K0K1A5 114 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 COX7A1P24310 79 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 BEAN1Q3B7T3 259 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
APTX-216ENST00000472896 DPM3Q9P2X0 92 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 UBE2E1P51965 193 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
APTX-216ENST00000472896 TRBV27A0A0K0K1C4 114 aa7.47□□□□□ -1.21
APTX-216ENST00000472896 OVOL1O14753 267 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms