RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 PGPEP1LA6NFU8 196 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 GATCO43716 136 aaKnown RBP3.56□□□□□ -1.84
SIK3-208ENST00000472648 ZNF80P51504 273 aaPredicted RBP3.56□□□□□ -1.84
SIK3-208ENST00000472648 SSTP61278 116 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 NDUFA5Q16718 116 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 OR2D3Q8NGH3 330 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 OCC1Q8TAD7 63 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 TVP23CQ96ET8 276 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 SAMD10Q9BYL1 202 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
SIK3-208ENST00000472648 IGLV10-54A0A075B6I4 117 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 SMIM17P0DL12 118 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 UBE2D1P51668 147 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 MPV17L2Q567V2 206 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 SPANXN1Q5VSR9 72 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 SMIM15Q7Z3B0 74 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 FER1L6-AS1Q8NA97 138 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 RNASE7Q9H1E1 156 aaKnown RBP3.55□□□□□ -1.84
SIK3-208ENST00000472648 CDIP1Q9H305 208 aa3.55□□□□□ -1.84
SIK3-208ENST00000472648 RPP21Q9H633 154 aaKnown RBP3.55□□□□□ -1.84
SIK3-208ENST00000472648 A0A087WWL8 130 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 TMEM218A2RU14 115 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 LINC00862A6NCI5 91 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 A8MWL6 223 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 KRBOX1C9JBD0 128 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 H3BVH4 76 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 M0R381 172 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 PPP1R2P9O14990 202 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 MT-ND4LP03901 98 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 SLPIP03973 132 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 ARMS2P0C7Q2 107 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 CRIP1P50238 77 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 PKIAP61925 76 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 PNRC1Q12796 327 aaPredicted RBP3.54□□□□□ -1.84
SIK3-208ENST00000472648 LINC01559Q495D7 138 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 ZFP2Q6ZN57 461 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 COX8CQ7Z4L0 72 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 ZFP82Q8N141 532 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
SIK3-208ENST00000472648 NUDT10Q8NFP7 164 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 OR10G8Q8NGN5 311 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 PRSS3P2Q8NHM4 247 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 NUDT11Q96G61 164 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 SFRP2Q96HF1 295 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 MLST8Q9BVC4 326 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 LINC00474Q9P2X8 69 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 Q9UF83 564 aa3.54□□□□□ -1.84
SIK3-208ENST00000472648 TRBV20OR9-2A0A075B6H5 130 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 A0A096LNI7 61 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 A8MWV9 139 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 C9JQL5 133 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 F2Z2F3 143 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 F5H697 171 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 K7EN84 100 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 TSPAN13O95857 204 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 MT-ND6P03923 174 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 GZMBP10144 247 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
SIK3-208ENST00000472648 RPS10P46783 165 aaKnown RBP3.53□□□□□ -1.84
SIK3-208ENST00000472648 RPL23P62829 140 aaKnown RBP3.53□□□□□ -1.84
SIK3-208ENST00000472648 TWIST1Q15672 202 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 KRTAP26-1Q6PEX3 210 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 ANAPC16Q96DE5 110 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 SEC11CQ9BY50 192 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 IL36BQ9NZH7 164 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
SIK3-208ENST00000472648 MUC21A0A140T8X8 626 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 C19orf71A6NCJ1 209 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 APOC3P02656 99 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 CXCL1P09341 107 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 TRGC1P0CF51 173 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 CRYGAP11844 174 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 S100PP25815 95 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 ZNF56Q15929 161 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 FAM74A4Q5TZK3 123 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.52□□□□□ -1.85
SIK3-208ENST00000472648 TSKUQ8WUA8 353 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 AP1S3Q96PC3 154 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 PRR34Q9NV39 138 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 NAT8BQ9UHF3 227 aa3.52□□□□□ -1.85
SIK3-208ENST00000472648 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 RHODO00212 210 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 SNAPINO95295 136 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 S100A8P05109 93 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 MGPP08493 103 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 OR5AL1P0C617 328 aa3.51□□□□□ -1.85
SIK3-208ENST00000472648 RNASE3P12724 160 aaKnown RBP3.51□□□□□ -1.85
SIK3-208ENST00000472648 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms