RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PMCHP20382 165 aa9.55□□□□□ -0.88
BRCA1-211ENST00000472490 BTF3L4Q96K17 158 aa9.55□□□□□ -0.88
BRCA1-211ENST00000472490 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
BRCA1-211ENST00000472490 CRPP02741 224 aa9.54□□□□□ -0.88
BRCA1-211ENST00000472490 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
BRCA1-211ENST00000472490 CKS2P33552 79 aa9.54□□□□□ -0.88
BRCA1-211ENST00000472490 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
BRCA1-211ENST00000472490 Q8N3U1 123 aa9.54□□□□□ -0.88
BRCA1-211ENST00000472490 APCSP02743 223 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 PPBPP02775 128 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 GAGE6Q13070 117 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 MRPL51Q4U2R6 128 aaKnown RBP9.53□□□□□ -0.88
BRCA1-211ENST00000472490 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 TMEM70Q9BUB7 260 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 TMEM242Q9NWH2 141 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
BRCA1-211ENST00000472490 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 A0A1B0GUV1 79 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 H7C423 109 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 VCYO14598 125 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 S100PP25815 95 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
BRCA1-211ENST00000472490 SUMO2P61956 95 aaKnown RBP9.52□□□□□ -0.89
BRCA1-211ENST00000472490 RBX1P62877 108 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 RHEBQ15382 184 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 C10orf91Q5T1B1 145 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 Q8N976 141 aa9.52□□□□□ -0.89
BRCA1-211ENST00000472490 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
BRCA1-211ENST00000472490 TRAV9-1A0A075B6T8 112 aa9.51□□□□□ -0.89
BRCA1-211ENST00000472490 GAS8-AS1O95177 125 aa9.51□□□□□ -0.89
BRCA1-211ENST00000472490 POLR2KP53803 58 aaKnown RBP9.51□□□□□ -0.89
BRCA1-211ENST00000472490 KIR2DL4Q99706 377 aa9.51□□□□□ -0.89
BRCA1-211ENST00000472490 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
BRCA1-211ENST00000472490 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 A0A087WTM6 91 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 SMKR1H3BMG3 65 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 PHOX2AO14813 284 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 TCAPO15273 167 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 FCER1GP30273 86 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 MIAQ16674 131 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 ORMDL3Q8N138 153 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 NRACQ8N912 160 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 DEFB104AQ8WTQ1 72 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
BRCA1-211ENST00000472490 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 D6R8Y8 96 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 AMMECR1LQ6DCA0 310 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
BRCA1-211ENST00000472490 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 TNFRSF6BO95407 300 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
BRCA1-211ENST00000472490 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 PRR34Q9NV39 138 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
BRCA1-211ENST00000472490 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 TSHBP01222 138 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-211ENST00000472490 REG3AQ06141 175 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 CDPF1Q6NVV7 123 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 TMEM136Q6ZRR5 245 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 SVBPQ8N300 66 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 RPS10P5Q9NQ39 176 aa9.47□□□□□ -0.89
BRCA1-211ENST00000472490 TRAV8-4A0A0B4J246 113 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 SNAPINO95295 136 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 APOC3P02656 99 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 ESDP10768 282 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 RNASEKQ6P5S7 137 aaKnown RBP9.46□□□□□ -0.9
BRCA1-211ENST00000472490 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 DNAH2Q9P225 4427 aa9.46□□□□□ -0.9
BRCA1-211ENST00000472490 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
BRCA1-211ENST00000472490 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
BRCA1-211ENST00000472490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-211ENST00000472490 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-211ENST00000472490 FGF6P10767 208 aa9.45□□□□□ -0.9
BRCA1-211ENST00000472490 COX19Q49B96 90 aa9.45□□□□□ -0.9
BRCA1-211ENST00000472490 C20orf203Q8NBC4 194 aa9.45□□□□□ -0.9
BRCA1-211ENST00000472490 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
BRCA1-211ENST00000472490 NPYP01303 97 aa9.44□□□□□ -0.9
BRCA1-211ENST00000472490 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
BRCA1-211ENST00000472490 Q8N814 137 aa9.44□□□□□ -0.9
BRCA1-211ENST00000472490 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-211ENST00000472490 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
BRCA1-211ENST00000472490 FRAS1Q86XX4 4008 aa9.44□□□□□ -0.9
BRCA1-211ENST00000472490 HLA-DQA1P01909 254 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 RAB5AP20339 215 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 KRTAP10-2P60368 255 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
BRCA1-211ENST00000472490 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
BRCA1-211ENST00000472490 C14orf177Q52M58 125 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms