RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 FHL3Q13643 280 aa12.76□□□□□ -0.37
RRP1-202ENST00000471909 PMVKQ15126 192 aa12.76□□□□□ -0.37
RRP1-202ENST00000471909 RNASE1P07998 156 aaKnown RBP12.75□□□□□ -0.37
RRP1-202ENST00000471909 CRYBA4P53673 196 aa12.75□□□□□ -0.37
RRP1-202ENST00000471909 SUMO4Q6EEV6 95 aa12.75□□□□□ -0.37
RRP1-202ENST00000471909 TEN1Q86WV5 123 aa12.75□□□□□ -0.37
RRP1-202ENST00000471909 LINC01006Q8NI28 216 aa12.75□□□□□ -0.37
RRP1-202ENST00000471909 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
RRP1-202ENST00000471909 FASNP49327 2511 aaKnown RBP12.75□□□□□ -0.37
RRP1-202ENST00000471909 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
RRP1-202ENST00000471909 SETD2Q9BYW2 2564 aaPredicted RBP12.74□□□□□ -0.37
RRP1-202ENST00000471909 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
RRP1-202ENST00000471909 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
RRP1-202ENST00000471909 TCL1BO95988 128 aa12.74□□□□□ -0.37
RRP1-202ENST00000471909 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
RRP1-202ENST00000471909 CCL24O00175 119 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
RRP1-202ENST00000471909 F5H697 171 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
RRP1-202ENST00000471909 FAM74A4Q5TZK3 123 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 Q6ZUT4 128 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
RRP1-202ENST00000471909 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 CARD19Q96LW7 228 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 C16orf95Q9H693 158 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 A8MWV9 139 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 CFC1P0CG37 223 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 XGP55808 180 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 KIR2DL4Q99706 377 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 VCX2Q9H322 139 aa12.72□□□□□ -0.37
RRP1-202ENST00000471909 HTN1P15515 57 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 TSPEAR-AS2P59090 65 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 RPL39P62891 51 aaKnown RBP12.71□□□□□ -0.37
RRP1-202ENST00000471909 SLC25A29Q8N8R3 303 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 TRAV26-1A0A087WT03 109 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 POLR2KP53803 58 aaKnown RBP12.71□□□□□ -0.37
RRP1-202ENST00000471909 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 TIMM17AQ99595 171 aa12.71□□□□□ -0.37
RRP1-202ENST00000471909 HECTD1Q9ULT8 2610 aa12.71□□□□□ -0.38
RRP1-202ENST00000471909 VCYO14598 125 aa12.7□□□□□ -0.38
RRP1-202ENST00000471909 SCGB1C2P0DMR2 95 aa12.7□□□□□ -0.38
RRP1-202ENST00000471909 SMR3AQ99954 134 aa12.7□□□□□ -0.38
RRP1-202ENST00000471909 PRM2P04554 102 aa12.7□□□□□ -0.38
RRP1-202ENST00000471909 PRO1854Q9UHT4 67 aa12.7□□□□□ -0.38
RRP1-202ENST00000471909 SBSPONQ8IVN8 264 aa12.69□□□□□ -0.38
RRP1-202ENST00000471909 LGALS3P17931 250 aaKnown RBP12.68□□□□□ -0.38
RRP1-202ENST00000471909 ZNF56Q15929 161 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 ODF3L2Q3SX64 289 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 NIPBLQ6KC79 2804 aaeCLIP12.68□□□□□ -0.38
RRP1-202ENST00000471909 J3QQQ9 107 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 M0QY20 66 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 HILS1P60008 231 aa12.68□□□□□ -0.38
RRP1-202ENST00000471909 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
RRP1-202ENST00000471909 SDHAF1A6NFY7 115 aa12.67□□□□□ -0.38
RRP1-202ENST00000471909 ANKRD29Q8N6D5 301 aa12.67□□□□□ -0.38
RRP1-202ENST00000471909 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
RRP1-202ENST00000471909 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
RRP1-202ENST00000471909 AMELXQ99217 191 aa12.66□□□□□ -0.38
RRP1-202ENST00000471909 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
RRP1-202ENST00000471909 A4D1N5 150 aa12.63□□□□□ -0.39
RRP1-202ENST00000471909 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
RRP1-202ENST00000471909 SLC25A20O43772 301 aa12.63□□□□□ -0.39
RRP1-202ENST00000471909 HIVEP2P31629 2446 aa12.63□□□□□ -0.39
RRP1-202ENST00000471909 LINC01587Q99440 93 aa12.63□□□□□ -0.39
RRP1-202ENST00000471909 NOTCH2Q04721 2471 aa12.62□□□□□ -0.39
RRP1-202ENST00000471909 TRPT1Q86TN4 253 aaKnown RBP12.62□□□□□ -0.39
RRP1-202ENST00000471909 C9JAW5 83 aa12.62□□□□□ -0.39
RRP1-202ENST00000471909 LEPROTO15243 131 aa12.62□□□□□ -0.39
RRP1-202ENST00000471909 INSP01308 110 aa12.62□□□□□ -0.39
RRP1-202ENST00000471909 ADARB2-AS1A8MUL3 147 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 M0R2P5 195 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 XCL2Q9UBD3 114 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 NDUFA7O95182 113 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 PROK1P58294 105 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 STHQ8IWL8 128 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 OTOGQ6ZRI0 2925 aa12.61□□□□□ -0.39
RRP1-202ENST00000471909 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
RRP1-202ENST00000471909 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
RRP1-202ENST00000471909 H7C2G1 150 aa12.6□□□□□ -0.39
RRP1-202ENST00000471909 LY6G6DO95868 133 aa12.6□□□□□ -0.39
RRP1-202ENST00000471909 OPRPNQ99935 248 aaPredicted RBP12.6□□□□□ -0.39
RRP1-202ENST00000471909 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
RRP1-202ENST00000471909 TMEM263Q8WUH6 116 aaKnown RBP12.6□□□□□ -0.39
RRP1-202ENST00000471909 A0A0B4J2C4 111 aa12.59□□□□□ -0.39
RRP1-202ENST00000471909 M0QXV9 152 aa12.59□□□□□ -0.39
RRP1-202ENST00000471909 RHOHQ15669 191 aa12.59□□□□□ -0.39
RRP1-202ENST00000471909 NSUN5P1Q3KNT7 163 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms