RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 NMBP08949 121 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 IGLC2P0DOY2 106 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 IAPPP10997 89 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 ORM2P19652 201 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 FAUP35544 74 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 TCL1AP56279 114 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 TAS2R30P59541 319 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 HIST1H1AQ02539 215 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 AKR1C1Q04828 323 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 ATP6V1FQ16864 119 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 ESRGQ1W209 222 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 IBA57Q5T440 356 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 Q5VSD8 79 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM14EPQ6UXP3 125 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 PATE2Q6UY27 113 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 DYNC2LI1Q8TCX1 351 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 RAB2BQ8WUD1 216 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 LINC01587Q99440 93 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 SLC25A21Q9BQT8 299 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 TMEM70Q9BUB7 260 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 GGACTQ9BVM4 153 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 NOP10Q9NPE3 64 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 MRPL16Q9NX20 251 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 RSL24D1Q9UHA3 163 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 PXMP4Q9Y6I8 212 aa1.79□□□□□ -2.12
HDAC9-221ENST00000471887 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
HDAC9-221ENST00000471887 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 A0A087WTM6 91 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 A0A0J9YY99 117 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 LINC00854A0A1B0GVQ3 168 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 C7orf71A4D174 169 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 SLC17A3O00476 420 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 SPINK4O60575 86 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 C1QBP02746 253 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 IL5P05113 134 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 SLC25A5P05141 298 aaKnown RBP1.78□□□□□ -2.12
HDAC9-221ENST00000471887 OR4E1P0C645 316 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 STAG3L3P0CL85 134 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 AP3S2P59780 193 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 RHOBP62745 196 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 PPP1R1AQ13522 171 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 PDE6HQ13956 83 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 SPCS2Q15005 226 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 GUK1Q16774 197 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 SPANXN5Q5MJ07 72 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 Q6ZTI0 123 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 LINC00305Q7Z4B0 112 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 BPIFA4PQ86YQ2 179 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 C10orf126Q8N4M7 172 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 ZNF431Q8TF32 576 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-221ENST00000471887 DIRAS2Q96HU8 199 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 MRPS26Q9BYN8 205 aaKnown RBP1.78□□□□□ -2.12
HDAC9-221ENST00000471887 PRO0255Q9UI72 69 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 V9GYH0 126 aa1.78□□□□□ -2.12
HDAC9-221ENST00000471887 TRBV19A0A075B6N1 114 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 C9orf170A2RU37 121 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 H3BP45 60 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 H3BQ15 152 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 NDUFB6O95139 128 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 OR5G3P0C626 314 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 CRYBA4P53673 196 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 TMBIM6P55061 237 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 SLC38A11Q08AI6 406 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 LINC01556Q5JQF7 62 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 Q6ZSA8 131 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 TMED4Q7Z7H5 227 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 IQCF2Q8IXL9 164 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 TOMM5Q8N4H5 51 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 ZFAND2AQ8N6M9 145 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 OR10P1Q8NGE3 313 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 LRRC20Q8TCA0 184 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 MGST2Q99735 147 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 PARD6GQ9BYG4 376 aaPredicted RBP1.77□□□□□ -2.13
HDAC9-221ENST00000471887 C11orf1Q9H5F2 150 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 NPVFQ9HCQ7 196 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 PSENENQ9NZ42 101 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 TMEM14CQ9P0S9 112 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 PAIP2BQ9ULR5 123 aaKnown RBP1.77□□□□□ -2.13
HDAC9-221ENST00000471887 FUT9Q9Y231 359 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 PRELID1Q9Y255 219 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 LY96Q9Y6Y9 160 aa1.77□□□□□ -2.13
HDAC9-221ENST00000471887 TRGV2A0A075B6R0 118 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 TRGV1A0A0A0MS02 117 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 TRAV12-3A0A0B4J271 114 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 RBAKDNA6NC62 111 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 NAP1L6A6NFF2 107 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 FABP12A6NFH5 140 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 M0R3E3 92 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 GATCO43716 136 aaKnown RBP1.76□□□□□ -2.13
HDAC9-221ENST00000471887 SSSCA1O60232 199 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 IFNA5P01569 189 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 ORM1P02763 201 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 METTL15P1P0C7V9 234 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 HIST1H1EP10412 219 aaKnown RBP1.76□□□□□ -2.13
HDAC9-221ENST00000471887 HTN1P15515 57 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 SRIP30626 198 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 RRAS2P62070 204 aaPredicted RBP1.76□□□□□ -2.13
HDAC9-221ENST00000471887 TDRG1Q3Y452 100 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 PCOTHQ58A44 107 aa1.76□□□□□ -2.13
HDAC9-221ENST00000471887 C10orf113Q5VZT2 155 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms