RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
COMMD1-207ENST00000471704 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
COMMD1-207ENST00000471704 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
COMMD1-207ENST00000471704 GFRA4Q9GZZ7 299 aa12.25□□□□□ -0.45
COMMD1-207ENST00000471704 NDUFS6O75380 124 aaKnown RBP12.24□□□□□ -0.45
COMMD1-207ENST00000471704 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
COMMD1-207ENST00000471704 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
COMMD1-207ENST00000471704 SCXQ7RTU7 201 aa12.24□□□□□ -0.45
COMMD1-207ENST00000471704 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
COMMD1-207ENST00000471704 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
COMMD1-207ENST00000471704 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
COMMD1-207ENST00000471704 USP17L23D6RBM5 183 aa12.23□□□□□ -0.45
COMMD1-207ENST00000471704 SMIM7Q9BQ49 75 aa12.23□□□□□ -0.45
COMMD1-207ENST00000471704 A8MWL6 223 aa12.22□□□□□ -0.45
COMMD1-207ENST00000471704 REG3AQ06141 175 aa12.22□□□□□ -0.45
COMMD1-207ENST00000471704 CT83Q5H943 113 aa12.22□□□□□ -0.45
COMMD1-207ENST00000471704 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
COMMD1-207ENST00000471704 A0A1B0GUV1 79 aa12.21□□□□□ -0.45
COMMD1-207ENST00000471704 PRSS1P07477 247 aa12.21□□□□□ -0.45
COMMD1-207ENST00000471704 PKHD1L1Q86WI1 4243 aa12.2□□□□□ -0.46
COMMD1-207ENST00000471704 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
COMMD1-207ENST00000471704 ZNF727A8MUV8 499 aa12.2□□□□□ -0.46
COMMD1-207ENST00000471704 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
COMMD1-207ENST00000471704 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
COMMD1-207ENST00000471704 COTL1Q14019 142 aa12.2□□□□□ -0.46
COMMD1-207ENST00000471704 KRTAP29-1A8MX34 341 aaPredicted RBP12.19□□□□□ -0.46
COMMD1-207ENST00000471704 C9JQL5 133 aa12.19□□□□□ -0.46
COMMD1-207ENST00000471704 AMTP48728 403 aa12.19□□□□□ -0.46
COMMD1-207ENST00000471704 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
COMMD1-207ENST00000471704 CIRBP-AS1Q8TBR5 109 aa12.19□□□□□ -0.46
COMMD1-207ENST00000471704 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
COMMD1-207ENST00000471704 J3QL48 77 aa12.18□□□□□ -0.46
COMMD1-207ENST00000471704 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
COMMD1-207ENST00000471704 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
COMMD1-207ENST00000471704 SRSF3P84103 164 aaKnown RBP12.17□□□□□ -0.46
COMMD1-207ENST00000471704 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
COMMD1-207ENST00000471704 V9GYV3 84 aa12.17□□□□□ -0.46
COMMD1-207ENST00000471704 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
COMMD1-207ENST00000471704 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
COMMD1-207ENST00000471704 SDHAF1A6NFY7 115 aa12.15□□□□□ -0.46
COMMD1-207ENST00000471704 UBE2L6O14933 153 aa12.15□□□□□ -0.46
COMMD1-207ENST00000471704 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
COMMD1-207ENST00000471704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-207ENST00000471704 TRAV8-4A0A0B4J246 113 aa12.14□□□□□ -0.47
COMMD1-207ENST00000471704 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
COMMD1-207ENST00000471704 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
COMMD1-207ENST00000471704 IGKV2-29A2NJV5 120 aaPredicted RBP12.14□□□□□ -0.47
COMMD1-207ENST00000471704 RPL23P62829 140 aaKnown RBP12.14□□□□□ -0.47
COMMD1-207ENST00000471704 TMEM191AQ9H0A3 160 aa12.14□□□□□ -0.47
COMMD1-207ENST00000471704 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
COMMD1-207ENST00000471704 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
COMMD1-207ENST00000471704 NCR2O95944 276 aa12.13□□□□□ -0.47
COMMD1-207ENST00000471704 RPS10P46783 165 aaKnown RBP12.13□□□□□ -0.47
COMMD1-207ENST00000471704 TEX261Q6UWH6 196 aa12.13□□□□□ -0.47
COMMD1-207ENST00000471704 RAB4AP20338 218 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 NUP35Q8NFH5 326 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 BORCS7Q96B45 105 aa12.12□□□□□ -0.47
COMMD1-207ENST00000471704 TSHBP01222 138 aa12.11□□□□□ -0.47
COMMD1-207ENST00000471704 APCSP02743 223 aa12.11□□□□□ -0.47
COMMD1-207ENST00000471704 AMN1Q8IY45 258 aa12.11□□□□□ -0.47
COMMD1-207ENST00000471704 PANO1I0J062 215 aa12.1□□□□□ -0.47
COMMD1-207ENST00000471704 I3L3M4 83 aa12.1□□□□□ -0.47
COMMD1-207ENST00000471704 SLPIP03973 132 aa12.1□□□□□ -0.47
COMMD1-207ENST00000471704 FAM74A3Q4VXF1 159 aa12.1□□□□□ -0.47
COMMD1-207ENST00000471704 FGF6P10767 208 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 ESDP10768 282 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 PMCHP20382 165 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
COMMD1-207ENST00000471704 ADIRFQ15847 76 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
COMMD1-207ENST00000471704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
COMMD1-207ENST00000471704 IGKV3OR2-268A0A0C4DH90 116 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 H7C423 109 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
COMMD1-207ENST00000471704 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
COMMD1-207ENST00000471704 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
COMMD1-207ENST00000471704 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
COMMD1-207ENST00000471704 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
COMMD1-207ENST00000471704 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
COMMD1-207ENST00000471704 SDIM1Q6ZPB5 146 aa12.07□□□□□ -0.48
COMMD1-207ENST00000471704 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
COMMD1-207ENST00000471704 NRACQ8N912 160 aa12.06□□□□□ -0.48
COMMD1-207ENST00000471704 NAT8BQ9UHF3 227 aa12.06□□□□□ -0.48
COMMD1-207ENST00000471704 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
COMMD1-207ENST00000471704 SMIM27A0A1W2PRY6 76 aa12.05□□□□□ -0.48
COMMD1-207ENST00000471704 OXTP01178 125 aa12.05□□□□□ -0.48
COMMD1-207ENST00000471704 RIGQ13278 110 aa12.05□□□□□ -0.48
COMMD1-207ENST00000471704 PEA15Q15121 130 aa12.05□□□□□ -0.48
COMMD1-207ENST00000471704 CHCHD10Q8WYQ3 142 aaPredicted RBP12.05□□□□□ -0.48
COMMD1-207ENST00000471704 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
COMMD1-207ENST00000471704 OR5A1Q8NGJ0 315 aa12.03□□□□□ -0.48
COMMD1-207ENST00000471704 SMDT1Q9H4I9 107 aa12.03□□□□□ -0.48
COMMD1-207ENST00000471704 FOXI1Q12951 378 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms