RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SOSTQ9BQB4 213 aa1.86□□□□□ -2.11
LRCH3-213ENST00000471667 BCL7BQ9BQE9 202 aa1.86□□□□□ -2.11
LRCH3-213ENST00000471667 SLIRPQ9GZT3 109 aaKnown RBP1.86□□□□□ -2.11
LRCH3-213ENST00000471667 RHBDL2Q9NX52 303 aa1.86□□□□□ -2.11
LRCH3-213ENST00000471667 SCN3BQ9NY72 215 aa1.86□□□□□ -2.11
LRCH3-213ENST00000471667 PRO0461Q9UI25 63 aa1.86□□□□□ -2.11
LRCH3-213ENST00000471667 C14orf166Q9Y224 244 aaKnown RBP1.86□□□□□ -2.11
LRCH3-213ENST00000471667 STRAPQ9Y3F4 350 aaKnown RBP1.86□□□□□ -2.11
LRCH3-213ENST00000471667 IGLV4-60A0A075B6I1 120 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 TRAV1-2A0A0B4J238 106 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 F6UZH7 168 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 BCL2L11O43521 198 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 SLC38A11Q08AI6 406 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 SPHARQ15513 63 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 UFSP1Q6NVU6 142 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 APH1BQ8WW43 257 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 IL36BQ9NZH7 164 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 TMEM14CQ9P0S9 112 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 KCNIP3Q9Y2W7 256 aa1.85□□□□□ -2.11
LRCH3-213ENST00000471667 FXYD6-FXYD2A0A087WZ82 144 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 F8WDY8 70 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 M0R036 132 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 ANXA3P12429 323 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 RNASE3P12724 160 aaKnown RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 CALB2P22676 271 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 RRAS2P62070 204 aaPredicted RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 MXD1Q05195 221 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 TMEM241Q24JQ0 296 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 RNASEKQ6P5S7 137 aaKnown RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 IZUMO2Q6UXV1 221 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 NTM-AS1Q6ZSK4 140 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 CLVS1Q8IUQ0 354 aaPredicted RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 SELENOHQ8IZQ5 122 aaKnown RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 ZFP82Q8N141 532 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 Q8NBF4 154 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 S100A16Q96FQ6 103 aaKnown RBP1.84□□□□□ -2.11
LRCH3-213ENST00000471667 SFRP2Q96HF1 295 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 TMEM101Q96IK0 257 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 C20orf166-AS1Q96NR2 134 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
LRCH3-213ENST00000471667 FAM236DA0A1B0GTK5 79 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 FNDC10F2Z333 226 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 K7EQM0 130 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 M0R381 172 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 COX7A2LO14548 114 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 NDUFA1O15239 70 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 CCL25O15444 150 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 IGLV6-57P01721 117 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 TCRAP04437 139 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 NBEAP1P0C6P0 100 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 TLX1NBP0CAT3 122 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 PRSS3P35030 304 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 CD164L2Q6UWJ8 174 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 TMEM91Q6ZNR0 172 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 Q6ZVH6 145 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 PRNTQ86SH4 94 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 C3orf22Q8N5N4 141 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 CCDC32Q9BV29 185 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 JPT2Q9H910 190 aa1.83□□□□□ -2.12
LRCH3-213ENST00000471667 MRPL35Q9NZE8 188 aaKnown RBP1.83□□□□□ -2.12
LRCH3-213ENST00000471667 CCDC59Q9P031 241 aaKnown RBP1.83□□□□□ -2.12
LRCH3-213ENST00000471667 ZNF706Q9Y5V0 76 aaPredicted RBP1.83□□□□□ -2.12
LRCH3-213ENST00000471667 PRSS46E5RG02 174 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 H3BP45 60 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 H3BVH4 76 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 SYNGR2O43760 224 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 GCGP01275 180 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 PYYP10082 97 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 CAMLGP49069 296 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 RPL37P61927 97 aaKnown RBP1.82□□□□□ -2.12
LRCH3-213ENST00000471667 RANP62826 216 aaKnown RBP1.82□□□□□ -2.12
LRCH3-213ENST00000471667 FABP5Q01469 135 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 SPAG11BQ08648 103 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 COTL1Q14019 142 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 IL18Q14116 193 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 DNAL1Q4LDG9 190 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 SMUG1Q53HV7 270 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 RNASE10Q5GAN6 216 aaKnown RBP1.82□□□□□ -2.12
LRCH3-213ENST00000471667 OR10D4PQ8NGN7 298 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 GLYATL2Q8WU03 294 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 HYLS1Q96M11 299 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 PACRGQ96M98 296 aaPredicted RBP1.82□□□□□ -2.12
LRCH3-213ENST00000471667 C9orf16Q9BUW7 83 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 GNB1LQ9BYB4 327 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 SMDT1Q9H4I9 107 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 GEMIN7Q9H840 131 aaKnown RBP1.82□□□□□ -2.12
LRCH3-213ENST00000471667 SHPKQ9UHJ6 478 aa1.82□□□□□ -2.12
LRCH3-213ENST00000471667 CTRLP40313 264 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 PPP1R1AQ13522 171 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 SCGB2B2Q4G0G5 96 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 ATP11AUNQ6ZP68 121 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 NRARPQ7Z6K4 114 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 MRPL55Q7Z7F7 128 aaKnown RBP1.81□□□□□ -2.12
LRCH3-213ENST00000471667 LINC01551Q86U37 167 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 AP3S1Q92572 193 aa1.81□□□□□ -2.12
LRCH3-213ENST00000471667 GGACTQ9BVM4 153 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms