RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 TWIST1Q15672 202 aa20.2■□□□□ 0.82
HMG20B-209ENST00000470356 OCC1Q8TAD7 63 aa20.2■□□□□ 0.82
HMG20B-209ENST00000470356 K7EN84 100 aa20.19■□□□□ 0.82
HMG20B-209ENST00000470356 RNASE7Q9H1E1 156 aaKnown RBP20.19■□□□□ 0.82
HMG20B-209ENST00000470356 COTL1Q14019 142 aa20.18■□□□□ 0.82
HMG20B-209ENST00000470356 GFRA4Q9GZZ7 299 aa20.18■□□□□ 0.82
HMG20B-209ENST00000470356 AMTP48728 403 aa20.16■□□□□ 0.82
HMG20B-209ENST00000470356 UBE2L6O14933 153 aa20.15■□□□□ 0.82
HMG20B-209ENST00000470356 SDIM1Q6ZPB5 146 aa20.15■□□□□ 0.82
HMG20B-209ENST00000470356 GATD1Q8NB37 220 aa20.15■□□□□ 0.82
HMG20B-209ENST00000470356 CNBPP62633 177 aaKnown RBP20.13■□□□□ 0.81
HMG20B-209ENST00000470356 Q6ZNX1 250 aa20.13■□□□□ 0.81
HMG20B-209ENST00000470356 GTSF1Q8WW33 167 aa20.13■□□□□ 0.81
HMG20B-209ENST00000470356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP20.12■□□□□ 0.81
HMG20B-209ENST00000470356 TRAV26-2A0A0B4J265 109 aa20.11■□□□□ 0.81
HMG20B-209ENST00000470356 hDV102S1A0JD36 115 aa20.11■□□□□ 0.81
HMG20B-209ENST00000470356 TMEM250H0YL14 139 aa20.11■□□□□ 0.81
HMG20B-209ENST00000470356 BLOC1S1P78537 153 aa20.1■□□□□ 0.81
HMG20B-209ENST00000470356 LRP1Q07954 4544 aaKnown RBP20.1■□□□□ 0.81
HMG20B-209ENST00000470356 RPL37AP61513 92 aaKnown RBP20.09■□□□□ 0.81
HMG20B-209ENST00000470356 SMIM15Q7Z3B0 74 aa20.09■□□□□ 0.81
HMG20B-209ENST00000470356 PANO1I0J062 215 aa20.08■□□□□ 0.81
HMG20B-209ENST00000470356 OXTP01178 125 aa20.08■□□□□ 0.81
HMG20B-209ENST00000470356 TEX261Q6UWH6 196 aa20.07■□□□□ 0.8
HMG20B-209ENST00000470356 ALKAL2Q6UX46 152 aa20.07■□□□□ 0.8
HMG20B-209ENST00000470356 AKAP14Q86UN6 197 aa20.07■□□□□ 0.8
HMG20B-209ENST00000470356 LYPD6BQ8NI32 183 aa20.07■□□□□ 0.8
HMG20B-209ENST00000470356 AP5S1Q9NUS5 200 aa20.07■□□□□ 0.8
HMG20B-209ENST00000470356 GATCO43716 136 aaKnown RBP20.06■□□□□ 0.8
HMG20B-209ENST00000470356 NCR2O95944 276 aa20.06■□□□□ 0.8
HMG20B-209ENST00000470356 FOXA3P55318 350 aaPredicted RBP20.06■□□□□ 0.8
HMG20B-209ENST00000470356 FAM231DQ6ZW35 169 aa20.06■□□□□ 0.8
HMG20B-209ENST00000470356 RPL39LQ96EH5 51 aaKnown RBP20.06■□□□□ 0.8
HMG20B-209ENST00000470356 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.04■□□□□ 0.8
HMG20B-209ENST00000470356 A8MWL6 223 aa20.04■□□□□ 0.8
HMG20B-209ENST00000470356 SLPIP03973 132 aa20.04■□□□□ 0.8
HMG20B-209ENST00000470356 CIRBPQ14011 172 aaKnown RBP20.04■□□□□ 0.8
HMG20B-209ENST00000470356 IGHV3-64A0A075B6Q5 118 aa20.03■□□□□ 0.8
HMG20B-209ENST00000470356 H7C423 109 aa20.02■□□□□ 0.8
HMG20B-209ENST00000470356 AMMECR1LQ6DCA0 310 aa20.02■□□□□ 0.8
HMG20B-209ENST00000470356 PKHD1L1Q86WI1 4243 aa20.02■□□□□ 0.79
HMG20B-209ENST00000470356 CT83Q5H943 113 aa20.01■□□□□ 0.79
HMG20B-209ENST00000470356 GAGE12HA6NDE8 117 aa20■□□□□ 0.79
HMG20B-209ENST00000470356 SDHAF1A6NFY7 115 aa20■□□□□ 0.79
HMG20B-209ENST00000470356 CFAP161Q6P656 301 aa20■□□□□ 0.79
HMG20B-209ENST00000470356 IGKV3OR2-268A0A0C4DH90 116 aa19.99■□□□□ 0.79
HMG20B-209ENST00000470356 APCSP02743 223 aa19.99■□□□□ 0.79
HMG20B-209ENST00000470356 FAT3Q8TDW7 4589 aa19.98■□□□□ 0.79
HMG20B-209ENST00000470356 C15orf56Q8N910 161 aa19.98■□□□□ 0.79
HMG20B-209ENST00000470356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.97■□□□□ 0.79
HMG20B-209ENST00000470356 IGKV2-29A2NJV5 120 aaPredicted RBP19.97■□□□□ 0.79
HMG20B-209ENST00000470356 CEBPGP53567 150 aa19.97■□□□□ 0.79
HMG20B-209ENST00000470356 RNASEKQ6P5S7 137 aaKnown RBP19.97■□□□□ 0.79
HMG20B-209ENST00000470356 TRBV6-5A0A0K0K1A5 114 aa19.96■□□□□ 0.79
HMG20B-209ENST00000470356 FGF6P10767 208 aa19.96■□□□□ 0.79
HMG20B-209ENST00000470356 HNRNPA3P51991 378 aaKnown RBP19.96■□□□□ 0.79
HMG20B-209ENST00000470356 RNF185Q96GF1 192 aa19.96■□□□□ 0.79
HMG20B-209ENST00000470356 hCG_2014768A0A024R1R8 64 aa19.95■□□□□ 0.78
HMG20B-209ENST00000470356 I3L3M4 83 aa19.95■□□□□ 0.78
HMG20B-209ENST00000470356 CHCHD10Q8WYQ3 142 aaPredicted RBP19.95■□□□□ 0.78
HMG20B-209ENST00000470356 BORCS7Q96B45 105 aa19.95■□□□□ 0.78
HMG20B-209ENST00000470356 DPH3Q96FX2 82 aa19.95■□□□□ 0.78
HMG20B-209ENST00000470356 NDUFS6O75380 124 aaKnown RBP19.94■□□□□ 0.78
HMG20B-209ENST00000470356 PMCHP20382 165 aa19.94■□□□□ 0.78
HMG20B-209ENST00000470356 SERTAD4-AS1Q5TG53 156 aa19.94■□□□□ 0.78
HMG20B-209ENST00000470356 SMIM7Q9BQ49 75 aa19.94■□□□□ 0.78
HMG20B-209ENST00000470356 FAM231BA6NCW3 169 aa19.93■□□□□ 0.78
HMG20B-209ENST00000470356 EIF5A2Q9GZV4 153 aaKnown RBP19.93■□□□□ 0.78
HMG20B-209ENST00000470356 CHTF8P0CG12 524 aa19.92■□□□□ 0.78
HMG20B-209ENST00000470356 ZNF25P17030 456 aaPredicted RBP19.92■□□□□ 0.78
HMG20B-209ENST00000470356 LINC01551Q86U37 167 aa19.92■□□□□ 0.78
HMG20B-209ENST00000470356 SPACA4Q8TDM5 124 aa19.92■□□□□ 0.78
HMG20B-209ENST00000470356 TSKUQ8WUA8 353 aa19.92■□□□□ 0.78
HMG20B-209ENST00000470356 A0A087WYN8 130 aa19.91■□□□□ 0.78
HMG20B-209ENST00000470356 A0A1B0GUT8 65 aa19.91■□□□□ 0.78
HMG20B-209ENST00000470356 HIGD1CA8MV81 97 aa19.9■□□□□ 0.78
HMG20B-209ENST00000470356 GAS8-AS1O95177 125 aa19.9■□□□□ 0.78
HMG20B-209ENST00000470356 RPS10P46783 165 aaKnown RBP19.9■□□□□ 0.78
HMG20B-209ENST00000470356 FAM210AQ96ND0 272 aa19.9■□□□□ 0.78
HMG20B-209ENST00000470356 TMEM191AQ9H0A3 160 aa19.9■□□□□ 0.78
HMG20B-209ENST00000470356 ST20Q9HBF5 79 aa19.9■□□□□ 0.78
HMG20B-209ENST00000470356 OR5A1Q8NGJ0 315 aa19.89■□□□□ 0.77
HMG20B-209ENST00000470356 ESDP10768 282 aa19.88■□□□□ 0.77
HMG20B-209ENST00000470356 HIGD2BQ4VC39 106 aa19.88■□□□□ 0.77
HMG20B-209ENST00000470356 BTF3L4Q96K17 158 aa19.88■□□□□ 0.77
HMG20B-209ENST00000470356 OSTCQ9NRP0 149 aa19.88■□□□□ 0.77
HMG20B-209ENST00000470356 ZNF727A8MUV8 499 aa19.87■□□□□ 0.77
HMG20B-209ENST00000470356 TSHBP01222 138 aa19.87■□□□□ 0.77
HMG20B-209ENST00000470356 TMEM101Q96IK0 257 aa19.87■□□□□ 0.77
HMG20B-209ENST00000470356 GVQW2A0A096LPI5 108 aaPredicted RBP19.86■□□□□ 0.77
HMG20B-209ENST00000470356 COX6A2Q02221 97 aa19.86■□□□□ 0.77
HMG20B-209ENST00000470356 FOXI1Q12951 378 aa19.86■□□□□ 0.77
HMG20B-209ENST00000470356 PLAC8Q9NZF1 115 aa19.86■□□□□ 0.77
HMG20B-209ENST00000470356 SRP19P09132 144 aaKnown RBP19.85■□□□□ 0.77
HMG20B-209ENST00000470356 RAB4AP20338 218 aa19.85■□□□□ 0.77
HMG20B-209ENST00000470356 POLR2KP53803 58 aaKnown RBP19.85■□□□□ 0.77
HMG20B-209ENST00000470356 MRAP2Q96G30 205 aa19.84■□□□□ 0.77
HMG20B-209ENST00000470356 TMEM242Q9NWH2 141 aa19.84■□□□□ 0.77
HMG20B-209ENST00000470356 TRBV27A0A0K0K1C4 114 aa19.82■□□□□ 0.76
HMG20B-209ENST00000470356 LINC00959A0A1B0GUT2 108 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms