RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
COL4A5-203ENST00000470339 GYPEP15421 78 aa10.6□□□□□ -0.71
COL4A5-203ENST00000470339 TMEM97Q5BJF2 176 aa10.6□□□□□ -0.71
COL4A5-203ENST00000470339 OR10D4PQ8NGN7 298 aa10.6□□□□□ -0.71
COL4A5-203ENST00000470339 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
COL4A5-203ENST00000470339 GTSF1LQ9H1H1 148 aa10.6□□□□□ -0.71
COL4A5-203ENST00000470339 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
COL4A5-203ENST00000470339 Q6ZTC4 211 aa10.59□□□□□ -0.71
COL4A5-203ENST00000470339 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
COL4A5-203ENST00000470339 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
COL4A5-203ENST00000470339 TRAV26-1A0A087WT03 109 aa10.58□□□□□ -0.72
COL4A5-203ENST00000470339 HTN3P15516 51 aa10.58□□□□□ -0.72
COL4A5-203ENST00000470339 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
COL4A5-203ENST00000470339 NANOS2P60321 138 aaKnown RBP10.58□□□□□ -0.72
COL4A5-203ENST00000470339 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
COL4A5-203ENST00000470339 CYSLTR1Q9Y271 337 aa10.58□□□□□ -0.72
COL4A5-203ENST00000470339 ATP5LO75964 103 aa10.57□□□□□ -0.72
COL4A5-203ENST00000470339 AKR1D1P51857 326 aa10.57□□□□□ -0.72
COL4A5-203ENST00000470339 MRPL23Q16540 153 aaKnown RBP10.57□□□□□ -0.72
COL4A5-203ENST00000470339 C2orf66Q6UXQ4 117 aa10.57□□□□□ -0.72
COL4A5-203ENST00000470339 C20orf203Q8NBC4 194 aa10.57□□□□□ -0.72
COL4A5-203ENST00000470339 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
COL4A5-203ENST00000470339 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
COL4A5-203ENST00000470339 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
COL4A5-203ENST00000470339 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
COL4A5-203ENST00000470339 IGHV3-38A0A0C4DH36 116 aa10.56□□□□□ -0.72
COL4A5-203ENST00000470339 ICOSQ9Y6W8 199 aa10.56□□□□□ -0.72
COL4A5-203ENST00000470339 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
COL4A5-203ENST00000470339 A0A0J9YY99 117 aa10.55□□□□□ -0.72
COL4A5-203ENST00000470339 ERASQ7Z444 233 aa10.55□□□□□ -0.72
COL4A5-203ENST00000470339 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
COL4A5-203ENST00000470339 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
COL4A5-203ENST00000470339 NPSP0C0P6 89 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 IFI27L1Q96BM0 104 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
COL4A5-203ENST00000470339 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
COL4A5-203ENST00000470339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.53□□□□□ -0.72
COL4A5-203ENST00000470339 H7C423 109 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 KRTDAPP60985 99 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 SMAGPQ0VAQ4 97 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
COL4A5-203ENST00000470339 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 IGIPA6NJ69 53 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 JOSD1Q15040 202 aaPredicted RBP10.52□□□□□ -0.73
COL4A5-203ENST00000470339 PET117Q6UWS5 81 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 TIMM21Q9BVV7 248 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.73
COL4A5-203ENST00000470339 A0A096LPF7 62 aa10.51□□□□□ -0.73
COL4A5-203ENST00000470339 TIRAPP58753 221 aa10.51□□□□□ -0.73
COL4A5-203ENST00000470339 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
COL4A5-203ENST00000470339 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
COL4A5-203ENST00000470339 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
COL4A5-203ENST00000470339 CSDC2Q9Y534 153 aaKnown RBP10.5□□□□□ -0.73
COL4A5-203ENST00000470339 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
COL4A5-203ENST00000470339 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
COL4A5-203ENST00000470339 Q6ZN92 141 aa10.49□□□□□ -0.73
COL4A5-203ENST00000470339 MRPL52Q86TS9 123 aaKnown RBP10.49□□□□□ -0.73
COL4A5-203ENST00000470339 C15orf53Q8NAA6 179 aa10.49□□□□□ -0.73
COL4A5-203ENST00000470339 TRAV12-1A0A0B4J245 112 aa10.48□□□□□ -0.73
COL4A5-203ENST00000470339 C20orf202A1L168 122 aa10.48□□□□□ -0.73
COL4A5-203ENST00000470339 PRSS1P07477 247 aa10.48□□□□□ -0.73
COL4A5-203ENST00000470339 PYY3Q5JQD4 70 aa10.48□□□□□ -0.73
COL4A5-203ENST00000470339 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
COL4A5-203ENST00000470339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
COL4A5-203ENST00000470339 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
COL4A5-203ENST00000470339 UBE2L6O14933 153 aa10.47□□□□□ -0.73
COL4A5-203ENST00000470339 SCGB1D1O95968 90 aa10.47□□□□□ -0.73
COL4A5-203ENST00000470339 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
COL4A5-203ENST00000470339 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
COL4A5-203ENST00000470339 LGALS9CQ6DKI2 356 aa10.47□□□□□ -0.73
COL4A5-203ENST00000470339 Q8N976 141 aa10.47□□□□□ -0.73
COL4A5-203ENST00000470339 FGF6P10767 208 aa10.46□□□□□ -0.73
COL4A5-203ENST00000470339 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
COL4A5-203ENST00000470339 LELP1Q5T871 98 aa10.46□□□□□ -0.73
COL4A5-203ENST00000470339 LYPD5Q6UWN5 251 aa10.46□□□□□ -0.73
COL4A5-203ENST00000470339 BAALCQ8WXS3 180 aa10.46□□□□□ -0.73
COL4A5-203ENST00000470339 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
COL4A5-203ENST00000470339 PKIAP61925 76 aa10.45□□□□□ -0.74
COL4A5-203ENST00000470339 PMVKQ15126 192 aa10.45□□□□□ -0.74
COL4A5-203ENST00000470339 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
COL4A5-203ENST00000470339 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
COL4A5-203ENST00000470339 A0A087WX48 190 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 AMMECR1LQ6DCA0 310 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 TMEM101Q96IK0 257 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 AMELXQ99217 191 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 VCX2Q9H322 139 aa10.44□□□□□ -0.74
COL4A5-203ENST00000470339 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
COL4A5-203ENST00000470339 PRSS29PA6NIE9 313 aa10.43□□□□□ -0.74
COL4A5-203ENST00000470339 H0Y8G0 127 aa10.43□□□□□ -0.74
COL4A5-203ENST00000470339 ODF1Q14990 250 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms