RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ARFGEF3Q5TH69 2177 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 URB2Q14146 1524 aaKnown RBP1.14□□□□□ -2.23
BRCA2-202ENST00000470094 MYOFQ9NZM1 2061 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 DOCK1Q14185 1865 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 TRPM7Q96QT4 1865 aa1.14□□□□□ -2.23
BRCA2-202ENST00000470094 DIP2AQ14689 1571 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 CFAP74Q9C0B2 1584 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 ATP7BP35670 1465 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD1P0DJD0 1748 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 IGLV3-32A0A0A0MS00 114 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 TRBV6-7A0A0A0MS04 114 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 BCE1O60756 84 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 CYB5AP00167 134 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 ADIRFQ15847 76 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 LINC00322Q6ZN03 302 aaPredicted RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 PMCHL2Q9BQD1 86 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 LRP5O75197 1615 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 RNF17Q9BXT8 1623 aaKnown RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 PHRF1Q9P1Y6 1649 aaKnown RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 EFCAB5A4FU69 1503 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 HEATR1Q9H583 2144 aaKnown RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 SCN11AQ9UI33 1791 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 PPRC1Q5VV67 1664 aaKnown RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 CFAP43Q8NDM7 1665 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 ITSN2Q9NZM3 1697 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 INTS1Q8N201 2190 aaKnown RBP1.13□□□□□ -2.23
BRCA2-202ENST00000470094 PLXNC1O60486 1568 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 DIP2BQ9P265 1576 aa1.13□□□□□ -2.23
BRCA2-202ENST00000470094 NINQ8N4C6 2090 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PLEKHH2Q8IVE3 1493 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PEAK1Q9H792 1746 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 DIDO1Q9BTC0 2240 aaKnown RBP1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PIK3C2BO00750 1634 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD8O14715 1765 aaPredicted RBP1.12□□□□□ -2.23
BRCA2-202ENST00000470094 LAMB1P07942 1786 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD4Q7Z3J3 1758 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD5Q99666 1765 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 KCPQ6ZWJ8 1503 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 A0A1W2PPM0 123 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 FAM24AA6NFZ4 105 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 IGHV3-30P01768 117 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 IGHV3-30-5P0DP03 117 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 CBLN1P23435 193 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 CCL8P80075 99 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PMCHL1Q16048 86 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 NMSQ5H8A3 153 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 DEFB121Q5J5C9 76 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PSMG4Q5JS54 123 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 C5orf38Q86SI9 138 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PPDPFLQ8WWR9 84 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
BRCA2-202ENST00000470094 S100A16Q96FQ6 103 aaKnown RBP1.12□□□□□ -2.23
BRCA2-202ENST00000470094 OBSCN-AS1Q96MR7 158 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 C20orf78Q9BR46 151 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 C22orf24Q9Y442 160 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 V9GYH0 126 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
BRCA2-202ENST00000470094 PATJQ8NI35 1801 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 RALGAPBQ86X10 1494 aa1.12□□□□□ -2.23
BRCA2-202ENST00000470094 DOCK11Q5JSL3 2073 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 ABCC1P33527 1531 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 ZNF142P52746 1687 aaPredicted RBP1.11□□□□□ -2.23
BRCA2-202ENST00000470094 LOC107984156A0A0G2JMH3 177 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 RBAKDNA6NC62 111 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 SNRPGP15A8MWD9 76 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 JMJD7-PLA2G4BH0Y9G9 81 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 SYS1-DBNDD2H3BUS1 97 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 J3QLW9 94 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 ATP5EP56381 51 aaPredicted RBP1.11□□□□□ -2.23
BRCA2-202ENST00000470094 WFDC2Q14508 124 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 C9orf153Q5TBE3 101 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 MIC13Q5XKP0 118 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 C12orf73Q69YU5 71 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 ARL17AQ8IVW1 177 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 ODF3Q96PU9 254 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 AMELYQ99218 206 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 TMEM14CQ9P0S9 112 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 C10orf71Q711Q0 1435 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 GLI2P10070 1586 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 UGGT1Q9NYU2 1555 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 RAPGEF6Q8TEU7 1601 aa1.11□□□□□ -2.23
BRCA2-202ENST00000470094 RGPD3A6NKT7 1758 aaPredicted RBP1.11□□□□□ -2.23
BRCA2-202ENST00000470094 NFAT5O94916 1531 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 HMGXB3Q12766 1538 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 SUPT6HQ7KZ85 1726 aaKnown RBP1.1□□□□□ -2.23
BRCA2-202ENST00000470094 TIAM1Q13009 1591 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 MAST1Q9Y2H9 1570 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 TRAV17A0A0B4J275 112 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 A0A0D9SFI3 127 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 UBE2L5PA0A1B0GUS4 154 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 KANTRA0A1W2PQU2 76 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 SNCGO76070 127 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 DNAL4O96015 105 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 PPYP01298 95 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 IGLV3-1P01715 115 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 IGKCP01834 107 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 ACYP1P07311 99 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 PDE6GP18545 87 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 UBE2L3P68036 154 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms