RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
SMC4-211ENST00000469858 FHL2Q14192 279 aa12.86□□□□□ -0.35
SMC4-211ENST00000469858 C20orf203Q8NBC4 194 aa12.86□□□□□ -0.35
SMC4-211ENST00000469858 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 IGIPA6NJ69 53 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 LYRM9A8MSI8 78 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 GAGE1Q13065 139 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 GAGE4Q13068 117 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 GAGE5Q13069 117 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 COTL1Q14019 142 aa12.85□□□□□ -0.35
SMC4-211ENST00000469858 ANK2Q01484 3957 aa12.84□□□□□ -0.35
SMC4-211ENST00000469858 A0A087WX48 190 aa12.83□□□□□ -0.35
SMC4-211ENST00000469858 LOC100131303A0A0U1RQF7 123 aa12.83□□□□□ -0.35
SMC4-211ENST00000469858 TIMM17AQ99595 171 aa12.83□□□□□ -0.35
SMC4-211ENST00000469858 MRPL35Q9NZE8 188 aaKnown RBP12.83□□□□□ -0.35
SMC4-211ENST00000469858 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
SMC4-211ENST00000469858 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
SMC4-211ENST00000469858 UBE2D3P61077 147 aa12.82□□□□□ -0.36
SMC4-211ENST00000469858 UBE2D2P62837 147 aa12.82□□□□□ -0.36
SMC4-211ENST00000469858 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
SMC4-211ENST00000469858 RETNQ9HD89 108 aa12.82□□□□□ -0.36
SMC4-211ENST00000469858 DPM2O94777 84 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 IGKCP01834 107 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 C14orf144Q96I85 54 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 DAZ4Q86SG3 579 aaKnown RBP12.81□□□□□ -0.36
SMC4-211ENST00000469858 MIEN1Q9BRT3 115 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
SMC4-211ENST00000469858 DAZ3Q9NR90 486 aaKnown RBP12.81□□□□□ -0.36
SMC4-211ENST00000469858 CHTOPQ9Y3Y2 248 aaKnown RBP12.81□□□□□ -0.36
SMC4-211ENST00000469858 PRSS29PA6NIE9 313 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 STPG4Q8N801 248 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 HHLA3Q9XRX5 114 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
SMC4-211ENST00000469858 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
SMC4-211ENST00000469858 F8VRH5 84 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
SMC4-211ENST00000469858 TCTAP57738 103 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 DAD1P61803 113 aa12.8□□□□□ -0.36
SMC4-211ENST00000469858 OPRPNQ99935 248 aaPredicted RBP12.8□□□□□ -0.36
SMC4-211ENST00000469858 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
SMC4-211ENST00000469858 PMVKQ15126 192 aa12.78□□□□□ -0.36
SMC4-211ENST00000469858 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
SMC4-211ENST00000469858 UQCR10Q9UDW1 63 aa12.78□□□□□ -0.36
SMC4-211ENST00000469858 SPART-AS1P0CW21 52 aa12.78□□□□□ -0.36
SMC4-211ENST00000469858 PLNP26678 52 aa12.78□□□□□ -0.36
SMC4-211ENST00000469858 CEMP1Q6PRD7 247 aaPredicted RBP12.77□□□□□ -0.37
SMC4-211ENST00000469858 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 CRYBA4P53673 196 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 NTM-AS1Q6ZSK4 140 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 DEFA6Q01524 100 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 UBE2D4Q9Y2X8 147 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 PYGO1Q9Y3Y4 419 aa12.76□□□□□ -0.37
SMC4-211ENST00000469858 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
SMC4-211ENST00000469858 NOTCH1P46531 2555 aa12.74□□□□□ -0.37
SMC4-211ENST00000469858 GYPEP15421 78 aa12.74□□□□□ -0.37
SMC4-211ENST00000469858 ATP5G1P05496 136 aa12.74□□□□□ -0.37
SMC4-211ENST00000469858 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
SMC4-211ENST00000469858 SPANXA1Q9NS26 97 aa12.74□□□□□ -0.37
SMC4-211ENST00000469858 VCX2Q9H322 139 aa12.73□□□□□ -0.37
SMC4-211ENST00000469858 IGLV4-69A0A075B6H9 119 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 RNASE13Q5GAN3 156 aaKnown RBP12.72□□□□□ -0.37
SMC4-211ENST00000469858 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 PAX4O43316 350 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 NMUP48645 174 aa12.72□□□□□ -0.37
SMC4-211ENST00000469858 HNRNPA3P51991 378 aaKnown RBP12.72□□□□□ -0.37
SMC4-211ENST00000469858 A0A0J9YY99 117 aa12.71□□□□□ -0.37
SMC4-211ENST00000469858 K7EIL1 84 aa12.71□□□□□ -0.37
SMC4-211ENST00000469858 HTN3P15516 51 aa12.71□□□□□ -0.37
SMC4-211ENST00000469858 SLC25A34Q6PIV7 304 aa12.71□□□□□ -0.37
SMC4-211ENST00000469858 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.37
SMC4-211ENST00000469858 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 C11orf86A6NJI1 115 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 F5H768 121 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 COX8AP10176 69 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 Q6ZUT4 128 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 TRBV25-1A0A075B6N4 114 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
SMC4-211ENST00000469858 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 NPSP0C0P6 89 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
SMC4-211ENST00000469858 DGAT2L7PQ6IED9 249 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 VSIG2Q96IQ7 327 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 AMELXQ99217 191 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 FGF6P10767 208 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 DEFB121Q5J5C9 76 aa12.69□□□□□ -0.38
SMC4-211ENST00000469858 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
SMC4-211ENST00000469858 A0A096LPF7 62 aa12.68□□□□□ -0.38
SMC4-211ENST00000469858 UBE2L6O14933 153 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms