RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 LINC00336Q6ZUF6 198 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 Q8N9W7 124 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 FDCSPQ8NFU4 85 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 PIMREGQ9BSJ6 248 aa6.61□□□□□ -1.35
SMARCE1-207ENST00000469334 NBEAQ8NFP9 2946 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM223BA6NKX1 122 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 ECSCRQ19T08 205 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 HIST2H2BDQ6DRA6 164 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 FAM218AQ96MZ4 157 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
SMARCE1-207ENST00000469334 A0A087WVE0 104 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 IGHV3-16A0A0C4DH30 117 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 GHRHP01286 108 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 TMEM86BQ8N661 226 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 TRBV10-3A0A0K0K1G6 114 aa6.59□□□□□ -1.35
SMARCE1-207ENST00000469334 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 NDUFA4O00483 81 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 ATP6V0E1O15342 81 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 FAM223AQ8IWN6 122 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 A8MZ25 164 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 H0YGX0 51 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 RS1O15537 224 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 C14orf132Q9NPU4 83 aa6.58□□□□□ -1.36
SMARCE1-207ENST00000469334 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 XCL1P47992 114 aa6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 Q9H8V8 135 aa6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 XCL2Q9UBD3 114 aa6.57□□□□□ -1.36
SMARCE1-207ENST00000469334 CRPP02741 224 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 V9GYY9 64 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 E7EQL1 145 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 Q9HAA7 133 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 UNC79Q9P2D8 2635 aa6.56□□□□□ -1.36
SMARCE1-207ENST00000469334 F6UB75 175 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 CCKP06307 115 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 SEC61GP60059 68 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 LYPD5Q6UWN5 251 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 FAM19A3Q7Z5A8 133 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 C16orf95Q9H693 158 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 H7BZZ5 65 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
SMARCE1-207ENST00000469334 CFAP54Q96N23 3096 aa6.54□□□□□ -1.36
SMARCE1-207ENST00000469334 DEFB1P60022 68 aa6.54□□□□□ -1.36
SMARCE1-207ENST00000469334 ZNF625Q96I27 306 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-207ENST00000469334 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 IGHV1OR15-1A0A075B7D0 117 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 WDFY3Q8IZQ1 3526 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 NDUFC1O43677 76 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 RNASE13Q5GAN3 156 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
SMARCE1-207ENST00000469334 G3V318 75 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 JMJD7-PLA2G4BH0Y9G9 81 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 A0A087WYN8 130 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 LYNX1G3V0Z9 82 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 LYNX1P0DP58 116 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 C19orf54Q5BKX5 351 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 PIK3CD-AS1Q5SR53 167 aa6.52□□□□□ -1.37
SMARCE1-207ENST00000469334 FRYLO94915 3013 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 ABCA4P78363 2273 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 SMIM1B2RUZ4 78 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 HOXD3P31249 432 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 UNQ9165/PRO28630Q6UXU0 137 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 MYO15AQ9UKN7 3530 aa6.51□□□□□ -1.37
SMARCE1-207ENST00000469334 HILS1P60008 231 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 IGFL3Q6UXB1 125 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 WNK2Q9Y3S1 2297 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 DMDP11532 3685 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 LINC00467Q9BRT7 94 aa6.5□□□□□ -1.37
SMARCE1-207ENST00000469334 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 H3BUA1 57 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 RHPN1-AS1Q9BWJ2 59 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 UBL5Q9BZL1 73 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 PIEZO1Q92508 2521 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 NCR3O14931 201 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 C5orf56Q8N8D9 126 aa6.49□□□□□ -1.37
SMARCE1-207ENST00000469334 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms