RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
HDAC3-204ENST00000469207 TRAV26-2A0A0B4J265 109 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 SULT1A2P50226 295 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 CACNG7P62955 275 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 BATF3Q9NR55 127 aa7.71□□□□□ -1.18
HDAC3-204ENST00000469207 UBE2L6O14933 153 aa7.7□□□□□ -1.18
HDAC3-204ENST00000469207 AMTP48728 403 aa7.7□□□□□ -1.18
HDAC3-204ENST00000469207 ZNF345Q14585 488 aa7.7□□□□□ -1.18
HDAC3-204ENST00000469207 C11orf52Q96A22 123 aa7.7□□□□□ -1.18
HDAC3-204ENST00000469207 RNF185Q96GF1 192 aa7.7□□□□□ -1.18
HDAC3-204ENST00000469207 TRBV20OR9-2A0A075B6H5 130 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 KANTRA0A1W2PQU2 76 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 BCL2L11O43521 198 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 IFNA1P01562 189 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
HDAC3-204ENST00000469207 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-204ENST00000469207 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
HDAC3-204ENST00000469207 COTL1Q14019 142 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 Q6ZNX1 250 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 GATD1Q8NB37 220 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 LINC00526Q96FQ7 95 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 PGLYRP4Q96LB8 373 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 DPH3P1Q9H4G8 78 aa7.69□□□□□ -1.18
HDAC3-204ENST00000469207 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-204ENST00000469207 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-204ENST00000469207 HMSDA8MTL9 139 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 NDUFS6O75380 124 aaKnown RBP7.68□□□□□ -1.18
HDAC3-204ENST00000469207 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 GNG4P50150 75 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 TWIST1Q15672 202 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 RGS21Q2M5E4 152 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 WDR73Q6P4I2 378 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 STPG4Q8N801 248 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 NUDT10Q8NFP7 164 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 CHCHD10Q8WYQ3 142 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-204ENST00000469207 RPL39LQ96EH5 51 aaKnown RBP7.68□□□□□ -1.18
HDAC3-204ENST00000469207 NUDT11Q96G61 164 aa7.68□□□□□ -1.18
HDAC3-204ENST00000469207 A0A096LNI7 61 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 F2Z2F3 143 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 C9orf62Q8N4C0 152 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 LINC01600Q96MT4 127 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 MANBALQ9NQG1 85 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 MED9Q9NWA0 146 aa7.67□□□□□ -1.18
HDAC3-204ENST00000469207 PRR3P79522 188 aaKnown RBP7.66□□□□□ -1.18
HDAC3-204ENST00000469207 RNASEKQ6P5S7 137 aaKnown RBP7.66□□□□□ -1.18
HDAC3-204ENST00000469207 CFAP161Q6P656 301 aa7.66□□□□□ -1.18
HDAC3-204ENST00000469207 TRAV1-1A0A0B4J248 108 aa7.65□□□□□ -1.18
HDAC3-204ENST00000469207 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
HDAC3-204ENST00000469207 FOXI1Q12951 378 aa7.65□□□□□ -1.18
HDAC3-204ENST00000469207 AMMECR1LQ6DCA0 310 aa7.65□□□□□ -1.18
HDAC3-204ENST00000469207 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
HDAC3-204ENST00000469207 K7EN84 100 aa7.64□□□□□ -1.19
HDAC3-204ENST00000469207 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
HDAC3-204ENST00000469207 FGF6P10767 208 aa7.64□□□□□ -1.19
HDAC3-204ENST00000469207 CTRLP40313 264 aa7.64□□□□□ -1.19
HDAC3-204ENST00000469207 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
HDAC3-204ENST00000469207 MEF2BQ02080 365 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-204ENST00000469207 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-204ENST00000469207 FAM231BA6NCW3 169 aa7.63□□□□□ -1.19
HDAC3-204ENST00000469207 XCL1P47992 114 aa7.63□□□□□ -1.19
HDAC3-204ENST00000469207 OCC1Q8TAD7 63 aa7.63□□□□□ -1.19
HDAC3-204ENST00000469207 LPAP08519 4548 aa7.62□□□□□ -1.19
HDAC3-204ENST00000469207 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
HDAC3-204ENST00000469207 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
HDAC3-204ENST00000469207 EIF5AP63241 154 aaKnown RBP7.62□□□□□ -1.19
HDAC3-204ENST00000469207 SMIM12Q96EX1 92 aa7.62□□□□□ -1.19
HDAC3-204ENST00000469207 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
HDAC3-204ENST00000469207 CCL25O15444 150 aa7.61□□□□□ -1.19
HDAC3-204ENST00000469207 PDE6DO43924 150 aa7.61□□□□□ -1.19
HDAC3-204ENST00000469207 APCSP02743 223 aa7.61□□□□□ -1.19
HDAC3-204ENST00000469207 SRSF9Q13242 221 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC3-204ENST00000469207 RPP21Q9H633 154 aaKnown RBP7.61□□□□□ -1.19
HDAC3-204ENST00000469207 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
HDAC3-204ENST00000469207 BCL2P10415 239 aa7.6□□□□□ -1.19
HDAC3-204ENST00000469207 SPINK6Q6UWN8 80 aa7.6□□□□□ -1.19
HDAC3-204ENST00000469207 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
HDAC3-204ENST00000469207 NCR2O95944 276 aa7.59□□□□□ -1.19
HDAC3-204ENST00000469207 PMCHP20382 165 aa7.59□□□□□ -1.19
HDAC3-204ENST00000469207 BIN3Q9NQY0 253 aa7.59□□□□□ -1.19
HDAC3-204ENST00000469207 TEX46H3BTG2 121 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 H7C423 109 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 I3L3M4 83 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 TSHBP01222 138 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 ESDP10768 282 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 CARD19Q96LW7 228 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 TMEM242Q9NWH2 141 aa7.58□□□□□ -1.2
HDAC3-204ENST00000469207 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
HDAC3-204ENST00000469207 A0A1W2PNN7 141 aa7.57□□□□□ -1.2
HDAC3-204ENST00000469207 GAGE2BQ13066 116 aa7.57□□□□□ -1.2
HDAC3-204ENST00000469207 BTF3L4Q96K17 158 aa7.57□□□□□ -1.2
HDAC3-204ENST00000469207 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
HDAC3-204ENST00000469207 ZNF561-AS1K7EIQ3 104 aa7.56□□□□□ -1.2
HDAC3-204ENST00000469207 GATCO43716 136 aaKnown RBP7.56□□□□□ -1.2
HDAC3-204ENST00000469207 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
HDAC3-204ENST00000469207 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
HDAC3-204ENST00000469207 Q6ZRP5 223 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms