RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 TRBV20-1A0A075B6N2 111 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 ELANEP08246 267 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
SMARCD3-205ENST00000469154 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 FOXI1Q12951 378 aa10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 OPRPNQ99935 248 aaPredicted RBP10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 F8P00451 2351 aa10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 ANK3Q12955 4377 aaKnown RBP10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 RHODO00212 210 aa10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 PRO1854Q9UHT4 67 aa10.44□□□□□ -0.74
SMARCD3-205ENST00000469154 IGLV4-3A0A075B6K6 122 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 INSL3P51460 131 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 VCX2Q9H322 139 aa10.43□□□□□ -0.74
SMARCD3-205ENST00000469154 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
SMARCD3-205ENST00000469154 CUBNO60494 3623 aa10.42□□□□□ -0.74
SMARCD3-205ENST00000469154 TCL1BO95988 128 aa10.42□□□□□ -0.74
SMARCD3-205ENST00000469154 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
SMARCD3-205ENST00000469154 PYGO1Q9Y3Y4 419 aa10.42□□□□□ -0.74
SMARCD3-205ENST00000469154 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
SMARCD3-205ENST00000469154 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
SMARCD3-205ENST00000469154 CRYBA4P53673 196 aa10.41□□□□□ -0.74
SMARCD3-205ENST00000469154 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
SMARCD3-205ENST00000469154 NSD1Q96L73 2696 aaPredicted RBP10.41□□□□□ -0.74
SMARCD3-205ENST00000469154 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
SMARCD3-205ENST00000469154 PPDPFLQ8WWR9 84 aa10.4□□□□□ -0.74
SMARCD3-205ENST00000469154 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
SMARCD3-205ENST00000469154 A4D1N5 150 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 A8MTW9 85 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 CD28P10747 220 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 ZNF702PQ9H963 129 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 NF1P21359 2839 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1A1P0DJD3 496 aaKnown RBP10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1CP0DJD4 496 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 SCGB1C2P0DMR2 95 aa10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 FN1P02751 2386 aaKnown RBP10.39□□□□□ -0.75
SMARCD3-205ENST00000469154 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 TRAV2A0A0B4J234 112 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 A8MWV9 139 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 M0R2P5 195 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 ESM1Q9NQ30 184 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 TNFRSF18Q9Y5U5 241 aa10.38□□□□□ -0.75
SMARCD3-205ENST00000469154 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 DEFB131AP59861 70 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 ZNF415Q09FC8 603 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 MUSTN1Q8IVN3 82 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 PTH2Q96A98 100 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
SMARCD3-205ENST00000469154 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 TMEM86BQ8N661 226 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 H3BMM0 161 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 M0QXV9 152 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 IGHV3-30-3P0DP02 117 aa10.36□□□□□ -0.75
SMARCD3-205ENST00000469154 MAST4O15021 2626 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 CARD19Q96LW7 228 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 HTN1P15515 57 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 SLURP1P55000 103 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 CDIP1Q9H305 208 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
SMARCD3-205ENST00000469154 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1BA6NDE4 496 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1EA6NEQ0 496 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 RBMY1DP0C7P1 496 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 SPXQ9BT56 116 aa10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 TEP1Q99973 2627 aaKnown RBP10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 PROK1P58294 105 aa10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
SMARCD3-205ENST00000469154 IGHV1-58A0A0C4DH39 117 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 A0A1B0GV72 72 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 ANKRD29Q8N6D5 301 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 DNAJC30Q96LL9 226 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 LINC00467Q9BRT7 94 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
SMARCD3-205ENST00000469154 SLC25A20O43772 301 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 HILS1P60008 231 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 Q1RN00 199 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
SMARCD3-205ENST00000469154 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms