RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 M0R143 59 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 COX8AP10176 69 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 MIFP14174 115 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 CRYBA4P53673 196 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 PMVKQ15126 192 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 DAZ4Q86SG3 579 aaKnown RBP6.68□□□□□ -1.34
SMC1A-205ENST00000469129 LINC00612Q8N6U2 182 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 DAZ3Q9NR90 486 aaKnown RBP6.68□□□□□ -1.34
SMC1A-205ENST00000469129 SPANXA1Q9NS26 97 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 MRPS16Q9Y3D3 137 aaKnown RBP6.68□□□□□ -1.34
SMC1A-205ENST00000469129 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 X6R8D5 127 aa6.68□□□□□ -1.34
SMC1A-205ENST00000469129 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
SMC1A-205ENST00000469129 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
SMC1A-205ENST00000469129 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
SMC1A-205ENST00000469129 EGFEM1PQ0D2K5 195 aa6.67□□□□□ -1.34
SMC1A-205ENST00000469129 Q6ZSN1 163 aa6.67□□□□□ -1.34
SMC1A-205ENST00000469129 PRADC1Q9BSG0 188 aa6.67□□□□□ -1.34
SMC1A-205ENST00000469129 A8MZ25 164 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 DLEU1O43261 78 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 EMP1P54849 157 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 UBE2D3P61077 147 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 HERVK_113P61574 105 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 UBE2D2P62837 147 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 TMEM97Q5BJF2 176 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 ZC2HC1BQ5TFG8 222 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 SLC25A29Q8N8R3 303 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 ZNRF2Q8NHG8 242 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 FBN3Q75N90 2809 aa6.66□□□□□ -1.34
SMC1A-205ENST00000469129 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
SMC1A-205ENST00000469129 NMUP48645 174 aa6.65□□□□□ -1.34
SMC1A-205ENST00000469129 OR11H2Q8NH07 326 aa6.65□□□□□ -1.34
SMC1A-205ENST00000469129 PHLDA1Q8WV24 401 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-205ENST00000469129 RNF183Q96D59 192 aa6.65□□□□□ -1.34
SMC1A-205ENST00000469129 CHCHD7Q9BUK0 85 aa6.65□□□□□ -1.34
SMC1A-205ENST00000469129 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 SIVA1O15304 175 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 CTAG1AP78358 180 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 STPG4Q8N801 248 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 C2orf88Q9BSF0 95 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 VCX2Q9H322 139 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 CST9LQ9H4G1 147 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 HHLA3Q9XRX5 114 aa6.64□□□□□ -1.35
SMC1A-205ENST00000469129 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 GAGE12JA6NER3 117 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 H7C423 109 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 EREGO14944 169 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 DEFB130BP0DP73 79 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 DEFB130AP0DP74 79 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 MRPS36P82909 103 aaKnown RBP6.63□□□□□ -1.35
SMC1A-205ENST00000469129 GAGE1Q13065 139 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 GAGE4Q13068 117 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 GAGE5Q13069 117 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 FHL2Q14192 279 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 GAGE13Q4V321 117 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 FAM222AQ5U5X8 452 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 DEFB104AQ8WTQ1 72 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 UBE2D4Q9Y2X8 147 aa6.63□□□□□ -1.35
SMC1A-205ENST00000469129 IGLV4-69A0A075B6H9 119 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 TRBV25-1A0A075B6N4 114 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 UBE2L6O14933 153 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 FGF6P10767 208 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 DAD1P61803 113 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 NFE4Q86UQ8 179 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 Q8NAQ8 132 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 AMELXQ99217 191 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 CHAC1Q9BUX1 264 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
SMC1A-205ENST00000469129 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-205ENST00000469129 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
SMC1A-205ENST00000469129 E9PLD3 99 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 ATP5G1P05496 136 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 KRTAP10-11P60412 298 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 TMEM243Q9BU79 118 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 Q9UF83 564 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
SMC1A-205ENST00000469129 NOTCH3Q9UM47 2321 aa6.61□□□□□ -1.35
SMC1A-205ENST00000469129 ZNF25P17030 456 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-205ENST00000469129 BATFQ16520 125 aa6.6□□□□□ -1.35
SMC1A-205ENST00000469129 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
SMC1A-205ENST00000469129 SAMD5Q5TGI4 173 aa6.6□□□□□ -1.35
SMC1A-205ENST00000469129 AMMECR1LQ6DCA0 310 aa6.6□□□□□ -1.35
SMC1A-205ENST00000469129 SBSPONQ8IVN8 264 aa6.6□□□□□ -1.35
SMC1A-205ENST00000469129 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
SMC1A-205ENST00000469129 TCTAP57738 103 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms