RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 TSKUQ8WUA8 353 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 SMIM3Q9BZL3 60 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
NEDD9-207ENST00000468612 DEFA3P59666 94 aa6.46□□□□□ -1.38
NEDD9-207ENST00000468612 RPL18AQ02543 176 aaKnown RBP6.46□□□□□ -1.38
NEDD9-207ENST00000468612 COTL1Q14019 142 aa6.46□□□□□ -1.38
NEDD9-207ENST00000468612 AP1S3Q96PC3 154 aa6.46□□□□□ -1.38
NEDD9-207ENST00000468612 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 A0A087X002 238 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 CCL25O15444 150 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 SIX6O95475 246 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 CXorf1O96002 111 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 NUDT15Q9NV35 164 aa6.45□□□□□ -1.38
NEDD9-207ENST00000468612 LINC00959A0A1B0GUT2 108 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 PLA2G10O15496 165 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 LTAP01374 205 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 MGPP08493 103 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 SSTP61278 116 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 AMMECR1LQ6DCA0 310 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 RASL11AQ6T310 242 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 FMC1Q96HJ9 113 aa6.44□□□□□ -1.38
NEDD9-207ENST00000468612 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
NEDD9-207ENST00000468612 TYMSOSQ8TAI1 123 aa6.43□□□□□ -1.38
NEDD9-207ENST00000468612 LYRM1O43325 122 aa6.42□□□□□ -1.38
NEDD9-207ENST00000468612 NOL3O60936 208 aaKnown RBP6.42□□□□□ -1.38
NEDD9-207ENST00000468612 IL7P13232 177 aa6.42□□□□□ -1.38
NEDD9-207ENST00000468612 EIF5AL1Q6IS14 154 aaKnown RBP6.42□□□□□ -1.38
NEDD9-207ENST00000468612 RNASEKQ6P5S7 137 aaKnown RBP6.42□□□□□ -1.38
NEDD9-207ENST00000468612 CD164L2Q6UWJ8 174 aa6.42□□□□□ -1.38
NEDD9-207ENST00000468612 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
NEDD9-207ENST00000468612 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
NEDD9-207ENST00000468612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-207ENST00000468612 IGKV2-29A2NJV5 120 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-207ENST00000468612 FAM74A7A6NL05 159 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 H7C423 109 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 ZNF861PO60384 105 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 H2AFB2P0C5Z0 115 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 UBE2G2P60604 165 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 UBE2G1P62253 170 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
NEDD9-207ENST00000468612 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-207ENST00000468612 BCL2L11O43521 198 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 NTF3P20783 257 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 Q6ZNX1 250 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 LINC00173Q6ZV60 143 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 FAM19A5Q7Z5A7 132 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-207ENST00000468612 PPP1R1CQ8WVI7 109 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 C2orf48Q96LS8 159 aa6.4□□□□□ -1.38
NEDD9-207ENST00000468612 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-207ENST00000468612 C19orf71A6NCJ1 209 aa6.39□□□□□ -1.39
NEDD9-207ENST00000468612 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
NEDD9-207ENST00000468612 ESDP10768 282 aa6.39□□□□□ -1.39
NEDD9-207ENST00000468612 ZNF25P17030 456 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-207ENST00000468612 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-207ENST00000468612 ACTR3CQ9C0K3 210 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-207ENST00000468612 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
NEDD9-207ENST00000468612 MPC2O95563 127 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 MBP02144 154 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 ATP6V0CP27449 155 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 UBE2BP63146 152 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 MT1HP80294 61 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 SS18Q15532 418 aa6.38□□□□□ -1.39
NEDD9-207ENST00000468612 PSMG3Q9BT73 122 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-207ENST00000468612 M0QXV9 152 aa6.37□□□□□ -1.39
NEDD9-207ENST00000468612 NCR2O95944 276 aa6.37□□□□□ -1.39
NEDD9-207ENST00000468612 H2BFSP57053 126 aa6.37□□□□□ -1.39
NEDD9-207ENST00000468612 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
NEDD9-207ENST00000468612 COX7A2LO14548 114 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 APCSP02743 223 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 MALP21145 153 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 SERF2P84101 59 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 LINC00304Q8N9R0 145 aa6.36□□□□□ -1.39
NEDD9-207ENST00000468612 TSHBP01222 138 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 PET100P0DJ07 73 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-207ENST00000468612 TMEM101Q96IK0 257 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 SSPOA2VEC9 5147 aa6.35□□□□□ -1.39
NEDD9-207ENST00000468612 CCDC160A6NGH7 325 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 G3V3Q6 166 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 AKR1C3P42330 323 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 CTAG1AP78358 180 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 BTF3L4Q96K17 158 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 CDC42SE2Q9NRR3 84 aa6.34□□□□□ -1.39
NEDD9-207ENST00000468612 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms