RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TMEM243Q9BU79 118 aa7.59□□□□□ -1.19
CDHR3-205ENST00000468143 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 GAS8-AS1O95177 125 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 HLA-DQA1P01909 254 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 AMTP48728 403 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 COTL1Q14019 142 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 ADIRFQ15847 76 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 ISOC2Q96AB3 205 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 V9GYV3 84 aa7.58□□□□□ -1.2
CDHR3-205ENST00000468143 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 EPM2AB3EWF7 344 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 UBE2L6O14933 153 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 MIAQ16674 131 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 GFRA4Q9GZZ7 299 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 PRR34Q9NV39 138 aa7.57□□□□□ -1.2
CDHR3-205ENST00000468143 REG3AQ06141 175 aa7.56□□□□□ -1.2
CDHR3-205ENST00000468143 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
CDHR3-205ENST00000468143 FRZBQ92765 325 aa7.56□□□□□ -1.2
CDHR3-205ENST00000468143 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
CDHR3-205ENST00000468143 NAT8Q9UHE5 227 aa7.56□□□□□ -1.2
CDHR3-205ENST00000468143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-205ENST00000468143 IGKV2-29A2NJV5 120 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-205ENST00000468143 FAM231BA6NCW3 169 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 SDHAF1A6NFY7 115 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 RAB4AP20338 218 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 PMCHP20382 165 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 AMN1Q8IY45 258 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 RNF185Q96GF1 192 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
CDHR3-205ENST00000468143 IGKV3OR2-268A0A0C4DH90 116 aa7.54□□□□□ -1.2
CDHR3-205ENST00000468143 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
CDHR3-205ENST00000468143 SMKR1H3BMG3 65 aa7.54□□□□□ -1.2
CDHR3-205ENST00000468143 RIGQ13278 110 aa7.54□□□□□ -1.2
CDHR3-205ENST00000468143 NAT8BQ9UHF3 227 aa7.54□□□□□ -1.2
CDHR3-205ENST00000468143 I3L3M4 83 aa7.53□□□□□ -1.2
CDHR3-205ENST00000468143 NCR2O95944 276 aa7.53□□□□□ -1.2
CDHR3-205ENST00000468143 RPS10P46783 165 aaKnown RBP7.53□□□□□ -1.2
CDHR3-205ENST00000468143 Q5VSD8 79 aa7.53□□□□□ -1.2
CDHR3-205ENST00000468143 AMMECR1LQ6DCA0 310 aa7.53□□□□□ -1.2
CDHR3-205ENST00000468143 ST20Q9HBF5 79 aa7.53□□□□□ -1.2
CDHR3-205ENST00000468143 TRBV6-5A0A0K0K1A5 114 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 APCSP02743 223 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 PRSS1P07477 247 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 CAMPP49913 170 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 C14orf177Q52M58 125 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
CDHR3-205ENST00000468143 SMDT1Q9H4I9 107 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
CDHR3-205ENST00000468143 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
CDHR3-205ENST00000468143 TSHBP01222 138 aa7.51□□□□□ -1.21
CDHR3-205ENST00000468143 MRAP2Q96G30 205 aa7.51□□□□□ -1.21
CDHR3-205ENST00000468143 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 INAFM2P0DMQ5 153 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 FGF6P10767 208 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 POLR2KP53803 58 aaKnown RBP7.5□□□□□ -1.21
CDHR3-205ENST00000468143 RAB14P61106 215 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 Q6ZSA8 131 aa7.5□□□□□ -1.21
CDHR3-205ENST00000468143 GAGE12HA6NDE8 117 aa7.49□□□□□ -1.21
CDHR3-205ENST00000468143 MRPL51Q4U2R6 128 aaKnown RBP7.49□□□□□ -1.21
CDHR3-205ENST00000468143 MRPL54Q6P161 138 aaKnown RBP7.49□□□□□ -1.21
CDHR3-205ENST00000468143 FAT1Q14517 4588 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 hDV102S1A0JD36 115 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 H7C423 109 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 ESDP10768 282 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 SCXQ7RTU7 201 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 NRACQ8N912 160 aa7.48□□□□□ -1.21
CDHR3-205ENST00000468143 TRBV27A0A0K0K1C4 114 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 VCYO14598 125 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 FCER1GP30273 86 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-205ENST00000468143 TMEM101Q96IK0 257 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 BTF3L4Q96K17 158 aa7.47□□□□□ -1.21
CDHR3-205ENST00000468143 DNAH8Q96JB1 4490 aa7.46□□□□□ -1.21
CDHR3-205ENST00000468143 CKS2P33552 79 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
CDHR3-205ENST00000468143 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 CLRN3Q8NCR9 226 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 OR5A1Q8NGJ0 315 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 CHAC1Q9BUX1 264 aa7.46□□□□□ -1.22
CDHR3-205ENST00000468143 A0A1B0GW15 77 aa7.45□□□□□ -1.22
CDHR3-205ENST00000468143 PPP1R17O96001 155 aa7.45□□□□□ -1.22
CDHR3-205ENST00000468143 SLPIP03973 132 aa7.45□□□□□ -1.22
CDHR3-205ENST00000468143 ZNF25P17030 456 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-205ENST00000468143 HBBP68871 147 aa7.45□□□□□ -1.22
CDHR3-205ENST00000468143 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
CDHR3-205ENST00000468143 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
CDHR3-205ENST00000468143 A0A1B0GXF2 115 aa7.44□□□□□ -1.22
CDHR3-205ENST00000468143 C7orf77A4D0Y5 90 aa7.44□□□□□ -1.22
CDHR3-205ENST00000468143 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
CDHR3-205ENST00000468143 D6R8Y8 96 aa7.44□□□□□ -1.22
CDHR3-205ENST00000468143 TNFRSF6BO95407 300 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms