RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 FAT1Q14517 4588 aa11.89□□□□□ -0.51
CGREF1-208ENST00000467539 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
CGREF1-208ENST00000467539 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
CGREF1-208ENST00000467539 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
CGREF1-208ENST00000467539 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
CGREF1-208ENST00000467539 Q6ZSA8 131 aa11.87□□□□□ -0.51
CGREF1-208ENST00000467539 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
CGREF1-208ENST00000467539 BORCS7Q96B45 105 aa11.87□□□□□ -0.51
CGREF1-208ENST00000467539 SMDT1Q9H4I9 107 aa11.87□□□□□ -0.51
CGREF1-208ENST00000467539 HIGD1CA8MV81 97 aa11.86□□□□□ -0.51
CGREF1-208ENST00000467539 REG3AQ06141 175 aa11.86□□□□□ -0.51
CGREF1-208ENST00000467539 DEFB104AQ8WTQ1 72 aa11.86□□□□□ -0.51
CGREF1-208ENST00000467539 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
CGREF1-208ENST00000467539 V9GYV3 84 aa11.86□□□□□ -0.51
CGREF1-208ENST00000467539 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 C9JQL5 133 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 FAM229AH3BQW9 127 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 NCR2O95944 276 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 AMTP48728 403 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 PEA15Q15121 130 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 TMEM191AQ9H0A3 160 aa11.85□□□□□ -0.51
CGREF1-208ENST00000467539 TRBV6-5A0A0K0K1A5 114 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 UBE2L6O14933 153 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 RPL23P62829 140 aaKnown RBP11.84□□□□□ -0.51
CGREF1-208ENST00000467539 HAMPP81172 84 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 Q5VSD8 79 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
CGREF1-208ENST00000467539 SDHAF1A6NFY7 115 aa11.83□□□□□ -0.52
CGREF1-208ENST00000467539 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CGREF1-208ENST00000467539 SRSF3P84103 164 aaKnown RBP11.83□□□□□ -0.52
CGREF1-208ENST00000467539 LINC01620Q4KN68 170 aa11.83□□□□□ -0.52
CGREF1-208ENST00000467539 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
CGREF1-208ENST00000467539 H7C423 109 aa11.82□□□□□ -0.52
CGREF1-208ENST00000467539 HLA-DQA1P01909 254 aa11.82□□□□□ -0.52
CGREF1-208ENST00000467539 RAB4AP20338 218 aa11.82□□□□□ -0.52
CGREF1-208ENST00000467539 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
CGREF1-208ENST00000467539 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
CGREF1-208ENST00000467539 SRRM2Q9UQ35 2752 aaKnown RBP11.82□□□□□ -0.52
CGREF1-208ENST00000467539 PRSS1P07477 247 aa11.81□□□□□ -0.52
CGREF1-208ENST00000467539 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
CGREF1-208ENST00000467539 RIGQ13278 110 aa11.81□□□□□ -0.52
CGREF1-208ENST00000467539 RNF185Q96GF1 192 aa11.81□□□□□ -0.52
CGREF1-208ENST00000467539 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
CGREF1-208ENST00000467539 I3L3M4 83 aa11.8□□□□□ -0.52
CGREF1-208ENST00000467539 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
CGREF1-208ENST00000467539 PMCHP20382 165 aa11.8□□□□□ -0.52
CGREF1-208ENST00000467539 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
CGREF1-208ENST00000467539 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
CGREF1-208ENST00000467539 ADIRFQ15847 76 aa11.79□□□□□ -0.52
CGREF1-208ENST00000467539 MRAP2Q96G30 205 aa11.79□□□□□ -0.52
CGREF1-208ENST00000467539 ST20Q9HBF5 79 aa11.79□□□□□ -0.52
CGREF1-208ENST00000467539 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
CGREF1-208ENST00000467539 APCSP02743 223 aa11.78□□□□□ -0.52
CGREF1-208ENST00000467539 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
CGREF1-208ENST00000467539 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
CGREF1-208ENST00000467539 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
CGREF1-208ENST00000467539 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.53
CGREF1-208ENST00000467539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.76□□□□□ -0.53
CGREF1-208ENST00000467539 IGKV2-29A2NJV5 120 aaPredicted RBP11.76□□□□□ -0.53
CGREF1-208ENST00000467539 ESDP10768 282 aa11.76□□□□□ -0.53
CGREF1-208ENST00000467539 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
CGREF1-208ENST00000467539 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
CGREF1-208ENST00000467539 PPP1R17O96001 155 aa11.75□□□□□ -0.53
CGREF1-208ENST00000467539 TSHBP01222 138 aa11.75□□□□□ -0.53
CGREF1-208ENST00000467539 FGF6P10767 208 aa11.75□□□□□ -0.53
CGREF1-208ENST00000467539 RPS10P46783 165 aaKnown RBP11.75□□□□□ -0.53
CGREF1-208ENST00000467539 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
CGREF1-208ENST00000467539 VCYO14598 125 aa11.74□□□□□ -0.53
CGREF1-208ENST00000467539 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
CGREF1-208ENST00000467539 SCXQ7RTU7 201 aa11.74□□□□□ -0.53
CGREF1-208ENST00000467539 A0A1B0GW15 77 aa11.73□□□□□ -0.53
CGREF1-208ENST00000467539 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
CGREF1-208ENST00000467539 NRACQ8N912 160 aa11.72□□□□□ -0.53
CGREF1-208ENST00000467539 CIRBP-AS1Q8TBR5 109 aa11.72□□□□□ -0.53
CGREF1-208ENST00000467539 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
CGREF1-208ENST00000467539 hDV102S1A0JD36 115 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 LINC00862A6NCI5 91 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 SMKR1H3BMG3 65 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.53
CGREF1-208ENST00000467539 CNBPP62633 177 aaKnown RBP11.71□□□□□ -0.53
CGREF1-208ENST00000467539 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.53
CGREF1-208ENST00000467539 CFAP161Q6P656 301 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
CGREF1-208ENST00000467539 IGKV3OR2-268A0A0C4DH90 116 aa11.7□□□□□ -0.54
CGREF1-208ENST00000467539 CAMPP49913 170 aa11.7□□□□□ -0.54
CGREF1-208ENST00000467539 MRPL52Q86TS9 123 aaKnown RBP11.7□□□□□ -0.54
CGREF1-208ENST00000467539 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
CGREF1-208ENST00000467539 SLPIP03973 132 aa11.69□□□□□ -0.54
CGREF1-208ENST00000467539 RAB14P61106 215 aa11.69□□□□□ -0.54
CGREF1-208ENST00000467539 SUMO2P61956 95 aaKnown RBP11.69□□□□□ -0.54
CGREF1-208ENST00000467539 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
CGREF1-208ENST00000467539 TRBV24-1A0A075B6N3 115 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms