RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 CCL18P55774 89 aa-0.09□□□□□ -2.42
ATG3-204ENST00000467275 SELENOWP63302 87 aa-0.09□□□□□ -2.42
ATG3-204ENST00000467275 PLCE1Q9P212 2302 aa-0.09□□□□□ -2.42
ATG3-204ENST00000467275 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
ATG3-204ENST00000467275 SPAARA0A1B0GVQ0 90 aa-0.1□□□□□ -2.43
ATG3-204ENST00000467275 NDUFA2O43678 99 aa-0.1□□□□□ -2.43
ATG3-204ENST00000467275 SPINK8P0C7L1 97 aa-0.1□□□□□ -2.43
ATG3-204ENST00000467275 SMIM6P0DI80 62 aa-0.1□□□□□ -2.43
ATG3-204ENST00000467275 KDM3BQ7LBC6 1761 aa-0.1□□□□□ -2.43
ATG3-204ENST00000467275 SPTBN2O15020 2390 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 TRAV13-2A0A0B4J235 113 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 A0A0D9SFI3 127 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 S100A12P80511 92 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 CCDC58Q4VC31 144 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 Q8N8P6 123 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 LSM10Q969L4 123 aaKnown RBP-0.11□□□□□ -2.43
ATG3-204ENST00000467275 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 CNFNQ9BYD5 112 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 LINC00470Q9BZP3 86 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 RERGLQ9H628 205 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 PHLPP1O60346 1717 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 ZNF292O60281 2723 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 CFTRP13569 1480 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
ATG3-204ENST00000467275 DOPEY2Q9Y3R5 2298 aa-0.12□□□□□ -2.43
ATG3-204ENST00000467275 ARAP2Q8WZ64 1704 aa-0.12□□□□□ -2.43
ATG3-204ENST00000467275 RBM3P98179 157 aaKnown RBP-0.12□□□□□ -2.43
ATG3-204ENST00000467275 CFAP126Q5VTH2 177 aa-0.12□□□□□ -2.43
ATG3-204ENST00000467275 COPS9Q8WXC6 57 aa-0.12□□□□□ -2.43
ATG3-204ENST00000467275 SNRNP25Q9BV90 132 aaKnown RBP-0.12□□□□□ -2.43
ATG3-204ENST00000467275 PTPRQQ9UMZ3 2332 aa-0.12□□□□□ -2.43
ATG3-204ENST00000467275 BIVM-ERCC5R4GMW8 1640 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 ZNF236Q9UL36 1845 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 ABCA2Q9BZC7 2435 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 PPP1R17O96001 155 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 C12orf73Q69YU5 71 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 Q6AWC8 147 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 ARL11Q969Q4 196 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 SERP1Q9Y6X1 66 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 R4GMQ9 66 aa-0.13□□□□□ -2.43
ATG3-204ENST00000467275 PIGBOS1A0A0B4J2F0 54 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 M0R135 149 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 GNG7O60262 68 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 MEIG1Q5JSS6 88 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 C10orf128Q5T292 105 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 AQP10Q96PS8 301 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 SCN3BQ9NY72 215 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 ZNF609O15014 1411 aa-0.14□□□□□ -2.43
ATG3-204ENST00000467275 MRC1P22897 1456 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 ZFHX3Q15911 3703 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 NHSL1Q5SYE7 1610 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 HMGN1P05114 100 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 IFITM1P13164 125 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 BTG2P78543 158 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 PRO0255Q9UI72 69 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 LENEPQ9Y5L5 61 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 PKDREJQ9NTG1 2253 aa-0.15□□□□□ -2.43
ATG3-204ENST00000467275 LAMC1P11047 1609 aa-0.16□□□□□ -2.43
ATG3-204ENST00000467275 ALMS1Q8TCU4 4167 aa-0.16□□□□□ -2.43
ATG3-204ENST00000467275 AKAP6Q13023 2319 aa-0.16□□□□□ -2.43
ATG3-204ENST00000467275 FAM25AB3EWG3 89 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 FAM25CB3EWG5 89 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 FAM25GB3EWG6 89 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 K7EP13 123 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 SPAG11BQ08648 103 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 SPAG11AQ6PDA7 123 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 SMIM4Q8WVI0 70 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 NAA60Q9H7X0 242 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 NPVFQ9HCQ7 196 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 PSME4Q14997 1843 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 PPIP5K1Q6PFW1 1433 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 NCOR1O75376 2440 aa-0.16□□□□□ -2.44
ATG3-204ENST00000467275 USF3Q68DE3 2245 aa-0.17□□□□□ -2.44
ATG3-204ENST00000467275 C10orf142B7Z368 130 aa-0.17□□□□□ -2.44
ATG3-204ENST00000467275 CFDP00746 253 aaPredicted RBP-0.17□□□□□ -2.44
ATG3-204ENST00000467275 Q56UQ5 140 aa-0.17□□□□□ -2.44
ATG3-204ENST00000467275 TTC9CQ8N5M4 171 aa-0.17□□□□□ -2.44
ATG3-204ENST00000467275 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
ATG3-204ENST00000467275 MYO7BQ6PIF6 2116 aa-0.17□□□□□ -2.44
ATG3-204ENST00000467275 LRRC37A2A6NM11 1700 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 M0R3E3 92 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 BCE1O60756 84 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 WFDC2Q14508 124 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 AMELXQ99217 191 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 SBF2Q86WG5 1849 aa-0.18□□□□□ -2.44
ATG3-204ENST00000467275 LRP6O75581 1613 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 CTXND1A0A1B0GTU2 59 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 LOC100130705A0A1B0GUX0 176 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.19□□□□□ -2.44
ATG3-204ENST00000467275 FAM107BQ9H098 131 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 LINC00472Q9H8W2 130 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 MBD5Q9P267 1494 aa-0.19□□□□□ -2.44
ATG3-204ENST00000467275 PRKDCP78527 4128 aaKnown RBP-0.2□□□□□ -2.44
ATG3-204ENST00000467275 TCHHQ07283 1943 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 TRAV22A0A0B4J277 110 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 FGF7P21781 194 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 HAMPP81172 84 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 TSC22D3Q99576 134 aa-0.2□□□□□ -2.44
ATG3-204ENST00000467275 SPANXDQ9BXN6 97 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms